Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0796 ATGGCACTAAGCAACAACGTCATAGGCGCCATTAACTTCGTTGCGGTGCTCCTCTCAATCCCAATCATCGGTGCCGGAATCTGGCTAACAACCGAACCAGCCGATTCATGTGTCAAAATTCTACAATGGCCAATCATAATCTTGGGGGTTCTTATATTTGTTGTGGCTCTGGCTGGGTTCATAGGGGCCTTTTGGAGAATCCCCATGCTTCTCGTATTTTACCTCATTGCCATGCTTGTGCTTATTGTGTTGCTGGTTTCCTTGGTGGTTTTCACCTATGCCGTCACCCTTAGAGGCCGTGGCAACATTGAGCCCAATCGGTCTTACTTGGAATATCGCATGGATGATTTCTCAATTTGGCTTCGTCGAAGGGTGAGGAGCTCCAGCAAGTGGGATGGCATCAGAAGCTGTCTTCGCTCTTCGAATATATGTGCTGACTTGGATCAACAGTACCGAACGGCTCAGGAATTCTTTAATGCACACCTAACCCCAATTCAGTCAGGGTGCTGCAAGCCACCAACAAAATGTGGTTACACGTTTGTGAATCCAACGTATTGGATTAGCCCTATCAACACGGCAGTAGACATGGATTGCATGAAATGGAGCAACGACCATGCACAGCTTTGCTACAACTGTGACTCGTGTAAAGCTGGATTGTTGGCAACCCTTAGGGTGGAGTGGAGAAGGGCCAATGTGATATTGATCGTTACTCTAGTTGCTTTAATTGCGGTGTATTTGGTAGGATGTTTTGCATTTAGGAATGCCAAGACAGAGGAGCTCTTTCGCAAATACAAGCAAGGCTACTCTTGA 810 0.4679 MALSNNVIGAINFVAVLLSIPIIGAGIWLTTEPADSCVKILQWPIIILGVLIFVVALAGFIGAFWRIPMLLVFYLIAMLVLIVLLVSLVVFTYAVTLRGRGNIEPNRSYLEYRMDDFSIWLRRRVRSSSKWDGIRSCLRSSNICADLDQQYRTAQEFFNAHLTPIQSGCCKPPTKCGYTFVNPTYWISPINTAVDMDCMKWSNDHAQLCYNCDSCKAGLLATLRVEWRRANVILIVTLVALIAVYLVGCFAFRNAKTEELFRKYKQGYS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0796 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Gso1g0796 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Gso1g0796 269 Pfam Tetraspanin family 6 249 IPR018499 GO:0016021
Gso1g0796 269 PRINTS Transmembrane four family signature 6 29 - -
Gso1g0796 269 PRINTS Transmembrane four family signature 38 64 - -
Gso1g0796 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0796 Gso-Chr1 29415157 29418449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0796 1 269 Miscellaneous Gene Families AT5G46700 67.658 3.69e-128 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0796 - - gmx:100789266 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0796 1 29415157 29418449 Gso1g0796 1 29415157 29418449 ECH