Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0564 ATGTCTCGGAAACTCGACAGCCCTGTGCAGACTCAGATGGCTGTGGCAGTGATAAGGAGCAGTCCCCTTGGGAGAGAGTATCATGGGAAGCAACCAGCGGGGCGGAGGCGCGTGTTCGTGCAGACGGAGAAAGGGTGTGTGCTGGGTATGGATTTGGATCGCGGTGACAATGTGCACACTGTTAAGAGGAGGCTGCAGCTTGCCCTCAATGTCCCGGTTGATGAGAGTTATCTCACTTTTGGGGATATGGTCTTCAAGAATGACCTTAGTGCTGTTCGGAACGATACCCCGCTTTTGCTCACTAGGGGGAAAAATAATCTAATGCCTAGGAGCTCCTCCACGCCGTGTCTGTCGCCGAAGGGGAGGGACATTGATAAAAGTGGACCTATCGAGATATTGGGACAGTCTAACCGGCTTGATGGGATCAAGCACATGATCAAGGACATTATGAAGGCGATTAAGATGGGGATTGAACCGATTCCTGTGCATAGTGGGCTTGGAGGTGCTTACTATTTCAGAAACAGTAAGGGGGAAAGTGTTGCAATTGTGAAGCCAACCGATGAGGAGCCTTTTGCCCCAAATAACCCGAAAGGTTTTGTTGGCAAGGCGCTTGGGCAGCCTGGGCTGAAGCGATCTGTTCGGGTCGGGGAGACTGGGTTTAGAGAGGTTGCTGCTTATCTTCTTGACTATGATCATTTTGCCAACGTGCCTCCTACTGCATTGGTGAAGATCACACACTCTGTGTTCAATGTGAATGATGGTGTCAATGGGAACAATTTGTGGCGGAAGAGGCTGTTTAGCAAGATTGCGTCTTTCCAGCAGTTTATTCCTCATGATTTTGATGCCAGTGATCATGGGACATCGAGTTTCCCGGTTGCTTCTGTGCATCGTATAGGGATTTTGGACATTAGGATTCTTAACACCGATAGGCATGCTGGGAACTTGTTGGTTAGGAAACTTGATGGCATTGGGAGTTTTGGTCAGGTGGAGTTGATTCCCATTGATCATGGGCTCTGCCTGCCTGAAACTTTGGAGGATCCATATTTTGAATGGATTCATTGGCCACAGGCTTCCATTCCGTTCTCAGAGGATGAGCTTGCCTACATTGAAGATCTTGACCCTTATCGGGATTGTGAGATGCTGAGAATGGAACTGCCGATGATCCGAGAGGCGTGTCTCAGAGTCTTGGTGCTGTGCACTATTTTCCTCAAGGAGGCTGCGGCTTATGGCCTTTGCCTCGCTGAAATTGGTGAGATGATGACTAGGGAGTTCCGCAGGGGTGAGGAGGAGCCCAGTGAACTTGAAGTTGTTTGTTTGGAGGCAAGGAAGATAGTGGCGGAGAGGGACAGGGAGGAACTGTCTCCCGGGGCTGAGATGAGAGATGATGAGTTTCTGTTTGATATAGATTATTATGATGAAGTTGGATCAGATTTTACGCCAAAGATGGCAATAGATGACCCCTTAACCAGAGCAACTTTTCAGCCTGCTCTTGGGAATGGGCATGCTCGTAACCCGCTTTCCAAATTGGATGAATGCATTGAGGAGGAAGAGGAGGAAGCTGAGGGAGAATCTCCAAAGGGATTTGTTACTTCTTCCACTGAAGAAAAAATCCCATCTGTTTCAGAACTTTCCGTGTCACTGAAAAATACCATGTTAGATGGGAAAAACCAGAATCAGCAGAAATATGGAGGAAAGGTGGATAATGGCCATTTTGCAAATACATCATCTGGTCATAAGAGTGCCAATGAGCAGCTTCCTCCAAGCATAAGCTTTGTGGATGTGACAGAAATGACCGAGGATGAATGGTCAAATTTTCTGGAGAAGTTTCAAGAGCTGCTGTATCCGGCATTTGCTAAGAGGAAATCCATAACCTTAGGTCAGAGGCAGAGACAGAGGCTTGGTACTTCCTGCCAGTTTTGA 1920 0.4797 MSRKLDSPVQTQMAVAVIRSSPLGREYHGKQPAGRRRVFVQTEKGCVLGMDLDRGDNVHTVKRRLQLALNVPVDESYLTFGDMVFKNDLSAVRNDTPLLLTRGKNNLMPRSSSTPCLSPKGRDIDKSGPIEILGQSNRLDGIKHMIKDIMKAIKMGIEPIPVHSGLGGAYYFRNSKGESVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPPTALVKITHSVFNVNDGVNGNNLWRKRLFSKIASFQQFIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLDGIGSFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDELAYIEDLDPYRDCEMLRMELPMIREACLRVLVLCTIFLKEAAAYGLCLAEIGEMMTREFRRGEEEPSELEVVCLEARKIVAERDREELSPGAEMRDDEFLFDIDYYDEVGSDFTPKMAIDDPLTRATFQPALGNGHARNPLSKLDECIEEEEEEAEGESPKGFVTSSTEEKIPSVSELSVSLKNTMLDGKNQNQQKYGGKVDNGHFANTSSGHKSANEQLPPSISFVDVTEMTEDEWSNFLEKFQELLYPAFAKRKSITLGQRQRQRLGTSCQF* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0564 639 Pfam Phosphatidylinositol 3- and 4-kinase 166 416 IPR000403 -
Gso1g0564 639 MobiDBLite consensus disorder prediction 102 118 - -
Gso1g0564 639 MobiDBLite consensus disorder prediction 102 121 - -
Gso1g0564 639 SUPERFAMILY Ubiquitin-like 36 89 IPR029071 -
Gso1g0564 639 MobiDBLite consensus disorder prediction 513 535 - -
Gso1g0564 639 CDD Ubl_ubiquitin_like 38 88 - -
Gso1g0564 639 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 5 639 IPR044571 -
Gso1g0564 639 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 156 453 IPR000403 -
Gso1g0564 639 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 5 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0564 Gso-Chr1 10927544 10930455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0564 1 639 Acyl Lipid Metabolism Gene Families AT1G26270 67.588 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0564 - - gmx:100776828 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0564 1 10927544 10930455 Gso2g1022 2 12147423 12150436 GST