Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0417 ATGAAACCCAACTTTTCATTTTTGTTTAAGCTTTTGATACTGCAATATCTAGCAGTTCTATCCATTTCTCAGGAATTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAAGCAGAGCTGCTGTTATCCCAAGACTGGGAAACCTTCAGCAGATTTCAGCATTCATGGACTTTGGCCTAACTACAATGATGGATCATGGCCCTCAAACTGTGACCCTGACAGTGTCTTTGATAAATCTCAGATCTCAGATCTCATTAGCAACATGGAGAAGGATTGGCCATCCCTGAGCTGTCCAAGTAGCAATGGCATGAGGTTCTGGTCACACGAATGGGAAAAACATGGTACATGTGCAGAATCTGAGCTTGATCAGCGCGAGTACTTTGAAACAACTCTCAAACTGAAGCAAAAAGTAAACCTCCTTCGGATCCTCAAGAATGCAGGGATTGAGCCAGATGATGGATTTTACACCCTAGAAAGCATTTCAGAAGCTATAAAAGAGGGAACTGGGTTTACCCCAGGGATAGAGTGCAATAGAGATTCAGCTCGTAATAGTCAACTTTACCAAGTCTACATGTGCGTGGACACTTCTGGGTCAAATCTTATTGAGTGCCCTGTGCTTCCAAGGAGCAAGTGTGGTGAACAAATTCAATTCCCCAAGTTTTAA 681 0.4288 MKPNFSFLFKLLILQYLAVLSISQEFDFFYFVQQWPGAYCDTKQSCCYPKTGKPSADFSIHGLWPNYNDGSWPSNCDPDSVFDKSQISDLISNMEKDWPSLSCPSSNGMRFWSHEWEKHGTCAESELDQREYFETTLKLKQKVNLLRILKNAGIEPDDGFYTLESISEAIKEGTGFTPGIECNRDSARNSQLYQVYMCVDTSGSNLIECPVLPRSKCGEQIQFPKF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0417 226 SUPERFAMILY Ribonuclease Rh-like 21 225 IPR036430 GO:0003723|GO:0033897
Gso1g0417 226 PANTHER RIBONUCLEASE T2 6 226 IPR001568 GO:0003723|GO:0033897
Gso1g0417 226 CDD RNase_T2_euk 26 217 IPR033697 -
Gso1g0417 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Gso1g0417 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
Gso1g0417 226 PANTHER F7A19.32 PROTEIN 6 226 - -
Gso1g0417 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Gso1g0417 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0417 Gso-Chr1 5683263 5686797 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0417 K01166 - gmx:100778239 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0417 1 5683263 5686797 Gso2g0907 2 10338567 10341012 GST