Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0404 ATGGTTATCTTAGCAGCCACTTCCAATAACAAGATCCATCAGTTGCAAACTTTCAACTCTCAGAACAATAACTACCACCTGCGCGATGCGTCCTTCTCATCGTACTTGAACAACAAAAAAGAGATCCTGGCTGAATCAGGCCATGGCTATGTCAGCAGCAGAAAGGAGCCTCTTGGAGTAAAGAAGGAAGATGATGGAGAGATTGGAGTATTTGAAGCTGAAAAGTACTTCAATGGAGAAGAGATGGAAAGCCCCCCAAGAATTGCTGATAATGACGCAAACAAGCACCTGCCCCAGAAAGATGAACAAACAGTTCTTGTAACTAGAAAGTACAAAGTTCAGTATGGAACTCCAAGTGTAAGGTCTGAGTCAAGCTTGAATAGCCAAAGTGCACTGTTGCAAAGTGCTGTGAGGAATTCCTCAAGGAACATGAAAAGCAAATTGCAGAGGAAGAGTTTTCTAGCTGGTCTTGGTTGCAAATGCTATTGTTCTGACAAGAATTCTGTTGATATTAGTGACCATGCAGGTGAAATCAGTTTCAGCAAAAATGCCACTCATGGAAAAACAACTTCAAGAAATATGTTCAATGCTGAGCCAGAGGCTAATCATTCATTTAAAATGACTAAGCCTAATGCAGCAGAAATTTCGATTAACAAAGATGTCTACTTTCAAAGGCCAGAGAAGTTAGGGGTGGGATTGAGCAAAGAAAACAGTTTAGCACTCTCAGCTGTGAATTCTATCTCAGGAAATCATCTGCTGAAAATGCAACTTCAGCAAGTAGAGAAGTCAAGGAATTCATTGGAAGTGTTTGGCTCCCCAATATTGAGTATCAGGAACAAGTCTTTAAGCTTTGATAAAAGGTTGGCAAAGACCTCTTCTTGGGACGATGCTCCTAAGATTGAAGAAACTGACTTCTCAGCAAAATCTGGAGGAAACTACAATGATGCTGATAGTGATGCAAGTTCAGACTTGTTTGAGATTGAAAGCCTCACAGGAAAATCCAACACCTTCCTTGGTAGATCAACATCCAATGTTGTTTCTAGCTGTGCCAGTCCCACAACTTGTTATGCACCAAGTGAGGTAAGCATTGAATGGAGTGTGGCCACTGCCAGTGCCTTGGAGTACTCAGCCATGTCAGATTATGATGATCAAAGGTCAATAGCAACCACAAGGAGTCCAATTAGGACATCCATAGTTTCCTCAAATGCTAAACCAAAAGTCATCAAAGAGATGCAGAGGCGGCGTCCTAGCATGCTGTTGGGTTGCAAGAGCCAGAAAGCTGTAGGAGTTGCTGTGAATGCCTTCACAACATATGAGAAAACAAGTTCTAACACGAATAGTCGTTGCAGGTCGGACACCTTCCCTCAGGTGACAGAGACAAAGGAAGGAAGTTTTGGTGCAAGACATAAGCAACATGCTTATGCAACAACCCCACTTCAGCGCTCACTCTCACCACATCCTTCACAACTCTTGTACATTTAG 1482 0.4244 MVILAATSNNKIHQLQTFNSQNNNYHLRDASFSSYLNNKKEILAESGHGYVSSRKEPLGVKKEDDGEIGVFEAEKYFNGEEMESPPRIADNDANKHLPQKDEQTVLVTRKYKVQYGTPSVRSESSLNSQSALLQSAVRNSSRNMKSKLQRKSFLAGLGCKCYCSDKNSVDISDHAGEISFSKNATHGKTTSRNMFNAEPEANHSFKMTKPNAAEISINKDVYFQRPEKLGVGLSKENSLALSAVNSISGNHLLKMQLQQVEKSRNSLEVFGSPILSIRNKSLSFDKRLAKTSSWDDAPKIEETDFSAKSGGNYNDADSDASSDLFEIESLTGKSNTFLGRSTSNVVSSCASPTTCYAPSEVSIEWSVATASALEYSAMSDYDDQRSIATTRSPIRTSIVSSNAKPKVIKEMQRRRPSMLLGCKSQKAVGVAVNAFTTYEKTSSNTNSRCRSDTFPQVTETKEGSFGARHKQHAYATTPLQRSLSPHPSQLLYI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0404 493 MobiDBLite consensus disorder prediction 442 471 - -
Gso1g0404 493 MobiDBLite consensus disorder prediction 442 460 - -
Gso1g0404 493 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 5 463 IPR039615 GO:0009638
Gso1g0404 493 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 5 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0404 Gso-Chr1 5404530 5407003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0404 - - gmx:100811572 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0404 1 5404530 5407003 Gso2g0896 2 10196338 10198759 GST