Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0344 ATGGATTTCACTTACCCTTCACTTCTCTCCATTTTCCTTCTCCTACTACTTCCTTCTCTGATCTCATCACAAATCTGCCAGAAAAACTGTGGCAAAGAAACTGTCAAGTACCCTTTTGGCAGTGGTCCTGGTTGTGGAGACCCTCGTTTCCAACCACATGTGACATGTAGCAACCAAAAGCTCACATTCACCACTCACACAGGCTCCTACCCTGTTACCTCAATTGACTACACCAACCAAGTCATATACATCTCAGATCCCACCATGTCAACATGCTCTTGCACTGTCCCTAGCAAAGGCTTTGGCCTTAACTGGGATGCACCATTTACCTTTGCTGATAGCACCATCTTTGCTCTAGTAGATTGCTCAATGAACTCATCATCCATATGCCAATCAAATGGCTATGATGATGGGAGCAATTCTAAGCTTTTATGTGATCAAGGGACACCAATTTGTAGTCTTCTATATTCATGCAGACCTATTAGCACCATCAACCTTCCAATCTCAACGTGCTGCGTTTACACGCCGGTTAATCTCGGTCCGGCTTTTGAGATGGATCTGCAGAAGCTGCAATGCCCTTCTTACACGGGGTTCTACAACTTCAATGATCAACAAACGGATCCTGAAAAGTGGAACTATGGAATAGCACTCAAATACAAGTTCAGTGTCACAAATGACTATCCTGGCTCGTGTGATGCGTGTGAAAGGAGCCATGGTGTGTGTGGGTATGGTGGAGCCTATAACTCGTTTGTCTGCAATTGTCCTAATGGGATTAACACTACAACAGATTGTTTCTTCATATCATCTTATAACAAGGGTTTTAGAAATGGGGTTGCTTGGTTGATCTATCCTGTAGCATGGTTTCTTGTTTGGTTTTTCTTGTAA 885 0.4339 MDFTYPSLLSIFLLLLLPSLISSQICQKNCGKETVKYPFGSGPGCGDPRFQPHVTCSNQKLTFTTHTGSYPVTSIDYTNQVIYISDPTMSTCSCTVPSKGFGLNWDAPFTFADSTIFALVDCSMNSSSICQSNGYDDGSNSKLLCDQGTPICSLLYSCRPISTINLPISTCCVYTPVNLGPAFEMDLQKLQCPSYTGFYNFNDQQTDPEKWNYGIALKYKFSVTNDYPGSCDACERSHGVCGYGGAYNSFVCNCPNGINTTTDCFFISSYNKGFRNGVAWLIYPVAWFLVWFFL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0344 294 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 291 - -
Gso1g0344 294 Pfam Wall-associated receptor kinase galacturonan-binding 26 86 IPR025287 GO:0030247
Gso1g0344 294 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 8 291 - -
Gso1g0344 294 Pfam Wall-associated receptor kinase C-terminal 203 256 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0344 Gso-Chr1 4326920 4328686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0344 29 123 Receptor kinase-like Gene Family AT5G02070 35.000 2.12e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0344 - - gmx:100788392 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0344 1 4326920 4328686 Gso2g0209 2 2180026 2181758 GST