Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0342 ATGGAAAGTAAAGGGAGAGGAGATCGCAGTGGCTATGGCATGGAGCTGAAGGAGAGAGGATCTGTGTCATCCAGCCTTGGAAACTCTGCAGAACTTGATGCCAATCTCACACTCAGCGATAAGCTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATAACTATGTTGCCTCCAAATCCCGCAGCATGAACGAGAAGGAGATAAGACACTTGTGTGCTTATCTTGTTGATCTGAAGAAGGCTTCGGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTACTCAGCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGAGAGCTGCTTTCCATGAGAAATCTTCTAAACACCCAGGCTGCTTTGGTTCATGGTTTAGCAGAAGGGTGCATGCTTAGTTCCATGATTAGTGGAAATGAAGATTCAGACATGGATGATTTACTAGCTGAAAAAACAGATATATCCAATACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCTATGACTGCATTGGACGAAGGAGAAAAAATGGCAAAAGAAATTAGTGAAGGGAAAACTTTAAGTCCAAGTTTATTCCAGGCATTGCAAGATGCCATTAATGAACACAGAAAAAAACTGGCTGATCAGCTAGCAGAAACTATCTGCCAGCCATCGACTCACAGTGCAGAGATTCGATCAACAGCATTGGCATTGAAAAATCTTGGGGACGGTCCTCGTGCTCATACATTACTACTAAATTCTCACCAAGAAACGTTGCAACGTAACATGAAAAACCTTCAATCCAGCAATTCTGGTGGAGTTGGAGCATTTACTGCTACCCTTTCTCAGCTTGTATTTTCAACCATTTCACAAGCAGCATCAGATTCTTTGTCAGTGTTTGCTGAAGAAGAACCTGCCTATACATCTGAGCTAGTAACTTGGGCAGTAACACAGGCTGAGAAATATGCTGTTCTCCTTAAGAAATGCATTCTTGCCTCTACAGCTGCGGCAGGAGGTTTGAGAGTTGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGTTATCAGCTAGAGGCTAGTGGGCTGGCCCTTTCCCCAATCCTAATAAAATATTTTAGGCCCTTTGTCAAGCAAGCACTGAACACAAATTTGAGAAGAATTGAACAAAGTAGTTCTGCACTAGCTGCTGCAGATGATTGGTTTCTTGCTTATGCACCAACCAGCAGCAGGCATTCTGGCCTACCTCCATCTTCTTCTCACAGTAACTTAAGTTTTCAACCAAAGCTTTCAAGAAGTGCTCACAAATTCAACTCAATGGTTCAGGAGCTATTTGAAGATGTAGGACCTCTTGAAATACTACAATTGGACGTTCTTGCAGTTGAAGGCCTTCTACAAGTGTTCAACTTCTATGTCAATTTGCTAATAAATGCATTGCCAGGTTCAGTGGTAACTGAGAATCTGGAAGGGCACAAAATTGTTAAGATTGCTGAGACCGAAGAACAGCAGATAGCATTGCTGGCTAATGCAATGTTGCTGGCAGATGAGCTTCTCCCGCGCGCTGTCATCAAACTTTCAAATAGCACCAGAGGTGATGACTCTCACAGGAGAGGATCAGACAAACAGCGTGAACTGAAGAAAAGGCTCCAACGTGAAGTTGATCGCCTGCGGGACAGCTTTTGCCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGAGAAGCTCGTCTAAATGCATTAATATATTTGGGAATGGATGGTAATGTAGAACAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGATTTTTGCAAAGCTTACGGATGTGGCAAGCATTGCAGCAGATCTGTTTGTGGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTCACAGAAACAGTGATCCTGTGGCTTTCTGATGACCAAACCTTCTGGGAAGAGGTTGAGACAGGATCAACACCTTTAGGTCCCATCGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATTTGCATCAAGCTATTAAAAACATTATTGAAAGGGCTATTAATGCTGTTGCCGCTACAGGTCTAGATCCCAACAGTGTCTTGCCGGAGGATGAATGGTTTGTTGAAGTTTGCGAAATAGCTATAAAGATGTTAACTGGGAGAGCAGCCTTTGACAACGTAGAGGATGATGTTGCTAGCCCCACTTCATCTGTCCAAACATAA 2280 0.4254 MESKGRGDRSGYGMELKERGSVSSSLGNSAELDANLTLSDKLKVFKSSTFDPNNYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLNTQAALVHGLAEGCMLSSMISGNEDSDMDDLLAEKTDISNTEKWLIGYLETLEVLLAEKRVDEAMTALDEGEKMAKEISEGKTLSPSLFQALQDAINEHRKKLADQLAETICQPSTHSAEIRSTALALKNLGDGPRAHTLLLNSHQETLQRNMKNLQSSNSGGVGAFTATLSQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVTQAEKYAVLLKKCILASTAAAGGLRVASECVHVCMSHCYQLEASGLALSPILIKYFRPFVKQALNTNLRRIEQSSSALAAADDWFLAYAPTSSRHSGLPPSSSHSNLSFQPKLSRSAHKFNSMVQELFEDVGPLEILQLDVLAVEGLLQVFNFYVNLLINALPGSVVTENLEGHKIVKIAETEEQQIALLANAMLLADELLPRAVIKLSNSTRGDDSHRRGSDKQRELKKRLQREVDRLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEIFAKLTDVASIAADLFVGRERFATVLLMRLTETVILWLSDDQTFWEEVETGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINAVAATGLDPNSVLPEDEWFVEVCEIAIKMLTGRAAFDNVEDDVASPTSSVQT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0342 759 Gene3D - 282 386 IPR042560 -
Gso1g0342 759 Pfam Vps51/Vps67 45 123 - -
Gso1g0342 759 PANTHER EXOCYST COMPLEX COMPONENT 8 17 758 IPR033961 GO:0000145|GO:0006887
Gso1g0342 759 Coils Coil 546 566 - -
Gso1g0342 759 MobiDBLite consensus disorder prediction 1 15 - -
Gso1g0342 759 MobiDBLite consensus disorder prediction 1 26 - -
Gso1g0342 759 SUPERFAMILY Cullin repeat-like 153 388 IPR016159 -
Gso1g0342 759 Coils Coil 207 227 - -
Gso1g0342 759 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 17 758 - -
Gso1g0342 759 Pfam Exocyst component 84 C-terminal 161 372 IPR032403 -
Gso1g0342 759 Gene3D - 151 274 IPR042561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0342 Gso-Chr1 4307402 4319024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0342 K19986 - gmx:100787854 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0342 1 4307402 4319024 Gso2g0211 2 2203594 2209688 GST