Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0327 ATGCTTCCCCTCCGCCTAAGCGCCGTCGTTTCCTCACTCATTCTCTGCTTCCTCTTCCCGCCACTGCTCTGCCTCGGAATCCGCTCTTTTCCCACCACCGCAGACGACGGCGCGTTCTTCCACTATTCAGAAGCGCCGGAGTACCGAAACGGAGCGGGTTGCCCCGTTTCGTCAACCCGTGTTTCCCTCCCTTCATGCGACCCTTCTCTGGTCCACATCGCCATGACCCTCGACTCCGGCTACCTCCGCGGCTCCATCGCCGCCGTGAACTCCGTCCTCCGCCACTCCTCGTGCCCGGAAAACGTCTTCTTCCACTTCATCGCCGCCGAGTTCGACCCGGCTAGCCCGCGGGTCCTGACCCGACTCGTCGGCTCCATTTTCCCCTCTCTGAACTTCAAAGTTTACATCTTTAGAGAAGACACTGTAATAAACCTAATCTCTTCTTCAATCCGACAAGCCCTAGAAAACCCCTTGAACTACGCGCGCAACTACCTCGGCGACATGCTCGACGCGTGCGTGTCCCGCGTGATCTACCTCGACTCCGACGTCGTCGTTGTCGACGACGTTGGCAAGCTCTGGCGCGCCCCAATCACGCGCGAGCGCGTGATCGCCGCGCCAGAGTACTGTCACGCGAACTTCACCAAGTACTTCACCGACGAGTTCTGGAACGACCCTCTACTCTCGCGCGTGTTCAGCACGCGCAAGCCGTGCTATTTCAACACCGGGGTGATGGTGATGGATTTGGCGAAGTGGAGGGAGGGGAACTACAGGAGGAAAATTGAGAACTGGATGGAGTTGCAGAGGAAGAAGAGGATTTATGAATTGGGTTCTTTGCCACCCTTTTTGCTTGTGTTTGGTGGGAACGTTGAAGCGATTGATCATAGGTGGAACCAGCATGGGCTTGGTGGGGATAATCTTAATGGGGTGTGTAGGTCTTTGCACCCTGGTCCTGTGAGTTTGCTTCATTGGAGTGGGAAAGGGAAACCTTGGGTTAGGCTTGATGAGAAGAAGCCTTGTCCCTTGGATAGTCTTTGGGAGCCTTATGATTTGTATAAACAGGTGAAGGATAGAGTCAGAGATCAGAATTGGGGCTTCTCTTCTTCTATTTTGGTTGGCTATGCTCATGACTTGTTATAA 1137 0.5462 MLPLRLSAVVSSLILCFLFPPLLCLGIRSFPTTADDGAFFHYSEAPEYRNGAGCPVSSTRVSLPSCDPSLVHIAMTLDSGYLRGSIAAVNSVLRHSSCPENVFFHFIAAEFDPASPRVLTRLVGSIFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDMLDACVSRVIYLDSDVVVVDDVGKLWRAPITRERVIAAPEYCHANFTKYFTDEFWNDPLLSRVFSTRKPCYFNTGVMVMDLAKWREGNYRRKIENWMELQRKKRIYELGSLPPFLLVFGGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKPCPLDSLWEPYDLYKQVKDRVRDQNWGFSSSILVGYAHDLL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0327 378 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 8 364 - -
Gso1g0327 378 Pfam Glycosyl transferase family 8 72 332 IPR002495 GO:0016757
Gso1g0327 378 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 349 IPR029044 -
Gso1g0327 378 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 364 - -
Gso1g0327 378 SUPERFAMILY Nucleotide-diphospho-sugar transferases 71 353 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0327 Gso-Chr1 4023198 4025027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0327 4 367 Glycosyltransferase AT1G70090 70.449 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0327 - - gmx:100813364 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0327 1 4023198 4025027 Gso2g0227 2 2415336 2417127 GST