Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0315 ATGTCCGATCCTTCGAGGGGTCGCGTTACCATTACTCTAGGGCGTAGCGGTCATGTTGTGAAGAGGGATGCATCTGCTGTAGATGTTTCTTCTTTCTCTTCTATTCATTCAGCTGGCACTAAGCGGTCTGTAAGAGACAGAATTGGAAGTAATGCAGATAGTTCTGGGTGGCATGGAAATGGACATAGCGGCAATAAACGACACCGAGGAGATGTAAGCATGCAAAATGGACTGGATGGCAATGATCTACGATTGAAGCTCATGCGAAAAAGTGCATTGGGGCAGGCTGACAGCAATGGCAGTAAGAGGCATATGGACCTCCGTGAAAAGCTGTCAAAGGCAAGTCACCCTCTGGCTAACACTTATAATTCGAAGCAGCATGGGCCAGATTCAAGGGAAACAAGTTTGAGGCAAATTCCCTCAGCTAGAAGTTCTGATAAATTACTGCGTATGGAATCCATGAGAAGCTCATACTCTCCTTGGACATTGGATCATATTAGGAGAAGATCACCAGATGGGTTTCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGGGATGTCCAAGACCTACATAGAAGGCCTGTAAGCAGGACATATGATGGTGTCAGATCAGTTTCATATGTAGGTAGGGATGTTCTTGAAACTTCGAGGCCTCCAATAAGTACACCCCAATCTTTCATGTCACGCTCCACAATGTCCACATTGCCTCCAGTAACTGTCAAGCCTGTAGCATCTCATCCTGGTCAACTTCCTCCATCGGGCAGTGTTGCTCAAAGGCCTTCATATGTGGGTGATGAACAAGTACAAGTACAACAATCTCACCAAACTGTGGATGGCCTATTACATGCATTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGGATTCCTATGGGTCCCAGGAAAAAAATTCTTCTTGCTGTCTTGCCCCGTACTAAGCGTCAACAATGA 1011 0.459 MSDPSRGRVTITLGRSGHVVKRDASAVDVSSFSSIHSAGTKRSVRDRIGSNADSSGWHGNGHSGNKRHRGDVSMQNGLDGNDLRLKLMRKSALGQADSNGSKRHMDLREKLSKASHPLANTYNSKQHGPDSRETSLRQIPSARSSDKLLRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQDLHRRPVSRTYDGVRSVSYVGRDVLETSRPPISTPQSFMSRSTMSTLPPVTVKPVASHPGQLPPSGSVAQRPSYVGDEQVQVQQSHQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLAVLPRTKRQQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0315 336 MobiDBLite consensus disorder prediction 165 190 - -
Gso1g0315 336 MobiDBLite consensus disorder prediction 116 142 - -
Gso1g0315 336 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Gso1g0315 336 SMART SAM_4 269 334 IPR001660 GO:0005515
Gso1g0315 336 MobiDBLite consensus disorder prediction 37 79 - -
Gso1g0315 336 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Gso1g0315 336 MobiDBLite consensus disorder prediction 237 261 - -
Gso1g0315 336 Pfam SAM domain (Sterile alpha motif) 272 328 IPR001660 GO:0005515
Gso1g0315 336 ProSiteProfiles SAM domain profile. 272 335 IPR001660 GO:0005515
Gso1g0315 336 MobiDBLite consensus disorder prediction 112 151 - -
Gso1g0315 336 Gene3D - 274 336 IPR013761 -
Gso1g0315 336 SUPERFAMILY SAM/Pointed domain 273 329 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0315 Gso-Chr1 3876724 3884022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0315 271 328 Glycosyltransferase AT3G07170 58.621 9.43e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0315 - - gmx:100796844 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0315 1 3876724 3884022 Gso2g0244 2 2621392 2628309 GST