Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0148 ATGCAAGCTTCTCTCATCCGAACCGGCTCCGTGCCGGTCCAGAACACGGTTCTCCCCGGTTCACCGCGAGTCTCACTCACGCGCCAAGCCTCCTTCTCCGGCGACAAGAGCCACGCGCATTCTCCCAGGTTTTCAATCCATTCTTCCCACTCCAACAACCGCAGATCCTCGTCGGAGCGCGACGACGAGAATTTCGGCGTTCGCCGGGATCTGAACCGAACCGGATCGCCCTCGTTTTCACCAATCGTACCTCACGAAGAAGACTTCCTCTCCGACGCCGCTCCGCGCAAGCTCGGAATCCGGCCGGAGGATCTACAATTCGGAGAAGGAGACGGTGGATTCCACCGCGGTGCGCCTCTCACCGGCGGAAACGGCGGCGAGAGGATGAAAATCGGCGCGTACTACGAGGAAATGTTGAGGTCTAATCCGACGGACGCGCTTCTGCTGAGAAACTACGGCAAATTTCTCCACGAGGTGGAGAAAGACACGGTCAGAGCAGAGGAATTTTACGGAAGAGCGATTCTCGCGAACCCTGGCGATGGCGAATTGCTTTCTCTCTACGGAACGCTTATTTGGGAAACGCAGAGAGACGAAGATAGAGCCAAATCTTACTTTGACCAAGCCATTCACGCCGCTCCTAATGATTGTACGGTGCTGGGATCGTATGCGCACTTCATGTGGGAAGCGGAGGAGGAGGAAGAAGAAGTTAACGGAGGAGCGACGGAGATAACGGCGACGGAGATGATCGTTGCTTTTTAA 759 0.5599 MQASLIRTGSVPVQNTVLPGSPRVSLTRQASFSGDKSHAHSPRFSIHSSHSNNRRSSSERDDENFGVRRDLNRTGSPSFSPIVPHEEDFLSDAAPRKLGIRPEDLQFGEGDGGFHRGAPLTGGNGGERMKIGAYYEEMLRSNPTDALLLRNYGKFLHEVEKDTVRAEEFYGRAILANPGDGELLSLYGTLIWETQRDEDRAKSYFDQAIHAAPNDCTVLGSYAHFMWEAEEEEEEVNGGATEITATEMIVAF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0148 252 Gene3D Tetratricopeptide repeat domain 124 236 IPR011990 GO:0005515
Gso1g0148 252 MobiDBLite consensus disorder prediction 1 52 - -
Gso1g0148 252 MobiDBLite consensus disorder prediction 53 69 - -
Gso1g0148 252 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 237 - -
Gso1g0148 252 MobiDBLite consensus disorder prediction 1 87 - -
Gso1g0148 252 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 237 - -
Gso1g0148 252 SUPERFAMILY TPR-like 133 234 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0148 Gso-Chr1 1667995 1669357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0148 - - gmx:100788211 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0148 1 1667995 1669357 Gso1g0148 1 1667995 1669357 ECH
Gso1g0148 1 1667995 1669357 Gso9g1698 9 41388350 41389533 GST