Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0133 ATGGAAGCAAAAATCGCAAAGGCATTGGATAGGGTTGCACTCAATCTGAAGCGCAAGCGAGCGACCCGATATGCTGCACATTTAAGTGGAGCTTCGCAGCCAATGTTAGGGCATTGGTCATCTCTTACGTCACAAACAAGCAAGGCTGTCAAACGCATGAGATTGGGTGGATATAGAAACAGGCTGACAAATGCTGGTCCTCATATTGGACGGTCCTTAGCTAGGCGTTTTTTGAATTATAAAAAGAGTGGGAGACTGGAGCGTTTGATGTTCTATGAGAATGGGGAATGGTTGGACTTTCCAAAGGATGTTGTTGACTTGGTTAAGAAGGATCTTGAAGTCAAGAAGGCAGCTGTGGAGATAGAATCAAATGGGTATCATCTTTTGTTTGATTTTTTACATCTGCATAAGGTGGACCTTAAAACTGGCTTGCAACAACCTATAGCTTTGATTGATGAGGCAGGGTGCTGTTTTTTCCCCGAAATCTATGCTGCTTCTGATGAAGAACCTTATAATTTGAGCAAACAGGAATGTGGAAAAAGTCCGGACTCATATGCATCTAATGAAATAAAATTACATTTAGAAGTTGAAATAAATGGTGTGGATCAATCCAGGTTGAGTGAGTGCAGTGGAGAGTCCAATGCTCTAGTTAAGGGTATTCAAATTGATACTAAACAAAACTGCTGTCAATATGATGTAGAAGTTGAAGATAGCATTAACAAAAAGGACTGTGGAAATGTTGGTGAAGACATTCAGCAACATCAAGACATAGGTTTAGATGCTTATACTGAATCAGTATATGGAATATTGGATCTGAATTCTGTACAAAAGATGTTTCTTAAGGGAATGAGTAGTTTTGGCAGTACTGATTCTGACATAGCTGAGATTTACCAATGCTCAGGTGCGTCAATGCAAGCACGATGGGAGCTGTTCCAGAAGCAAGCTGAACTTACCAAAAAGAATCATGGGGAAGCTAACATTCGGTATGCTTGGCTTGCTTCTTCTAAAGGAGAACTATCTACAATGATGAACTATGGACTAAGTCATTATGGATTATCTGGATCAAAGTGCACATATGGCATTGGTGTTCATCTTGCTGCTGTTACTTGCCCTGACGCCAGTGTGCGTTATTGTGATGTTGACGAAAACGGGGTTCGACACTTGGCCCTTTGTCGCGTAATAATGGGGAACATGGAGATTCTCCAGCCTGGCACTGGTCAGTTTCATCCCAGTAGTTGTGAATATGATAATGGGGTAGATTCCATTGAATGTCCACGATACTATGTGGTGTGGAATATGAACATGAACACCCACATCTATCCGGAATTCGTTGTTAGCTTCAAAGTCTCATCTGATGCTGAAGGTCATTTTTGTGGAAGTGAGGGTAAGAATGTTTCTGGGGTTAATTCAGCCTGTCAGGGTCCTCATGGCTTGTTACATTCAGAATCTTCTACTGTAGATAATGGAAAAGCTCCTAGTATGGTTGCTAGCACCCCAAAAGTTCCAAAATCCCCTTGGATGCCTTTTCCTTTGCTTCTTGATGCTATCAGAAATCAGGTTCCTCCCAAGGGTATGGATGTAATCAAAATATATTATGAACAATTCAGGTCAAAGCATATATCGCGGGATGATTTTGTGAAGATGCTGAGGTTAATAGTTGGAGATGGTCTGTTGAGAACTACAATAACAAATCTTCAGTTCAAGATACCTTCCGGTGGTGAATTGAAAGGCTCAATCAAGAAGGAAGTCTGA 1752 0.4115 MEAKIAKALDRVALNLKRKRATRYAAHLSGASQPMLGHWSSLTSQTSKAVKRMRLGGYRNRLTNAGPHIGRSLARRFLNYKKSGRLERLMFYENGEWLDFPKDVVDLVKKDLEVKKAAVEIESNGYHLLFDFLHLHKVDLKTGLQQPIALIDEAGCCFFPEIYAASDEEPYNLSKQECGKSPDSYASNEIKLHLEVEINGVDQSRLSECSGESNALVKGIQIDTKQNCCQYDVEVEDSINKKDCGNVGEDIQQHQDIGLDAYTESVYGILDLNSVQKMFLKGMSSFGSTDSDIAEIYQCSGASMQARWELFQKQAELTKKNHGEANIRYAWLASSKGELSTMMNYGLSHYGLSGSKCTYGIGVHLAAVTCPDASVRYCDVDENGVRHLALCRVIMGNMEILQPGTGQFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVSSDAEGHFCGSEGKNVSGVNSACQGPHGLLHSESSTVDNGKAPSMVASTPKVPKSPWMPFPLLLDAIRNQVPPKGMDVIKIYYEQFRSKHISRDDFVKMLRLIVGDGLLRTTITNLQFKIPSGGELKGSIKKEV* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0133 583 Gene3D - 270 449 - -
Gso1g0133 583 MobiDBLite consensus disorder prediction 479 499 - -
Gso1g0133 583 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 569 - -
Gso1g0133 583 ProSiteProfiles RST domain profile. 500 571 IPR022003 -
Gso1g0133 583 ProSiteProfiles PARP catalytic domain profile. 249 466 IPR012317 GO:0003950
Gso1g0133 583 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 569 IPR044964 -
Gso1g0133 583 Pfam RCD1-SRO-TAF4 (RST) plant domain 502 566 IPR022003 -
Gso1g0133 583 SUPERFAMILY ADP-ribosylation 273 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0133 Gso-Chr1 1524149 1530346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0133 - - gmx:100800707 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0133 1 1524149 1530346 Gso1g0133 1 1524149 1530346 ECH
Gso1g0133 1 1524149 1530346 Gso9g1712 9 41517610 41523508 GST