Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0101 ATGCAGAAATTGGGAGGGTTCAAACTACCACCTTTCTTCAATTACCCACCTTATTTCACTTTGCAGCCAGTAAGAGACACGAGAGAGAAGCAGATACAACTATGGAAAGATCTAATTTTAGATTTTTGTAAAACACAGAAGATATTTGTAATTGGGCTTGAAGAAGAATTTCCTCTATTTACAAATCATGGAATTGAAAGGTCTCTTACTCATGAAGCCAGAGAAGCTTTCCTTTCTGCATTAGTGTCTGAAGGACGTGCAGAATGGATGGATAAAGGACATAGGAAATGTCTTATTCTCTGGTATCGGCTTCAAGATTGGGCTGACATTTTAATACAGTTTGCAAAAAATAATGGGCTGGAAGATGGTGTTGTCACAGTAGAAGAAATACGAACAGGGACCGAATCTCAAGGAACAGGGACAATGTGCATGATTTTTCCTGGAGGATAA 450 0.3867 MQKLGGFKLPPFFNYPPYFTLQPVRDTREKQIQLWKDLILDFCKTQKIFVIGLEEEFPLFTNHGIERSLTHEAREAFLSALVSEGRAEWMDKGHRKCLILWYRLQDWADILIQFAKNNGLEDGVVTVEEIRTGTESQGTGTMCMIFPGG* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0101 149 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 139 IPR008570 GO:0000814|GO:0071985
Gso1g0101 149 Gene3D - 5 100 IPR014041 -
Gso1g0101 149 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Gso1g0101 149 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 25 2 139 - -
Gso1g0101 149 Pfam ESCRT-II complex subunit 13 139 IPR008570 GO:0000814|GO:0071985
Gso1g0101 149 Gene3D - 101 144 IPR036388 -
Gso1g0101 149 SUPERFAMILY "Winged helix" DNA-binding domain 103 144 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0101 Gso-Chr1 1113458 1117883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0101 K12189 - gmx:100798066 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0101 1 1113458 1117883 Gso1g0101 1 1113458 1117883 ECH
Gso1g0101 1 1113458 1117883 Gso9g1733 9 41786766 41790084 GST