Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0099 ATGGATCAAAATAGGGGAGAGAGCTGGAGGGAATTAGTGAAGAAGATGCTTCCTCCTGGTGCTTCCATACCTGCTGATGCTTCTAATCTTGATTACTCCATAGCAATGGAATATGTTGGTCCACCAGTTTCATATGATGTACCAAGAGTTGAGCCCTTTGACGCAAACTCAAGAGCAATTCCCACTGCTCAACCACTCTCTGGATCACAAAGATCAAGTACTCATGGGGGCCATATGGTGATTGAACCAATCCCTCTACCGGTGTCTCGTATTGCTGGCGTAACGAGCTCTCCTAATCAAAGTCCAAGGGTGTCAGGAAGTTCAGATTCTGTGGTTTCTGTCTTACAGAACCCAGATCTTTCTTCTGCGACACCTTCGGCTTCGCCTGCTTCAGTTCATAATCCTCCTAGCAATCCTCCTAAGCCAGGTAATGAAGCGAAGAGAGCACCGGTTGTCACTTTTAATACTGTTGATAGACCTCAGAGGAAAGAGGTGGAGGTTGTGAAGCCAGTTTATTCGGAATACGTTGGAGTTTTGAAAGAAAGGAAGAAAAAGAAAATAAGAGTTTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACAAAGGAGTCTTGCATAGTTTGTAATGCCAAGTATTGCAGCAACTGTGTGCTTAGGGCAATGGGATCAATGCCTGAAGGACGTAAATGTGTAACATGCATTGGTCAGCCAATTGATGAATCGAGGAGACTGAAATTGGGTAAATATTCAAGGGTGTTGTCCCGACTGTTAAGTCCTCTAGAAGTCAAGCAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCAGAGCAGTTGATTGTCAATGGATTGCCCCTGAAGCCTGAAGAGATGGCAGAATTACTTGGATGTCCCTTACCTCCACGTAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATAAGTTCAAACTTGAATTTCAATGGGAAACTTAGCCTCGATGCTAGTAATGGAAACACCGAGGTTTACATGAATGGTCGAGAGATCACAAAACTTGAATTGAGGGTACTCAAGCTGGCAAATGTGCAGTGTCCACGTGATACACACTTTTGGGTCTATGACGATGGTCGTTATGAGGAGGAAGGTCAAAATAATATCAGAGGAAACATTTGGGAGAAGGCCTCAACAAGATTCGTATGTGCCTTATTCTCTCTACCCTTTCCCCATGGTCAGCCTCATGGGCAAAAGGATGAAACTAGTCACTATACCACAGTTCCTAATTATCTGGAACAGAAAAAGACTCAGAAGCTTCTTCTTCTTGGAATTCAAGGATCTGGCACTAGCACTATATTTAAGCAGGCCAAGTTTTTGTATGGGAACAGATTTTCTGATGAAGAGCTTCAGGATGTCAAATTGATGATCCAGAGTAACATGTATAAATATCTTAGTATTTTACTTGATGGAAGAGAGCGCTTTGAAGAGGAGGCTGTTTCTAGAATGAATGGACAAGGTTCTCCCGGTCAAACTATGGAAACAGGTAGCAATGGTGAAGCAAGTAATACTAGTGAATGCATCTATTCCCTCAACCCAAGACTAAAACATTTCTCTGACTGGCTCCTGGACATTATAGCCACTGGGGATTTAGATGCCTTCTTCCCTGCAGCCACACGGGAATATGCACCATTAGTTGAAGAAGTATGGAGGGACCCTGCAATACAAGAAACCTTCAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTTGCCGAGTACTTCTTAAGCCGGGCTGTTGAGATATCTAGCAATGAATACGAACCTTCTGAAAGGGACATAGTATATGCAGAAGGGGTTACTCAGGGAAATGGTTTGGCTTTCATGGAGTTTTCTCTTGATGACCGTGTCCCAAAGTCTGATACTTATTTGGAGAACTTGGATGCTCAACTGCCACCACTGACCAAGTATCAACTCATTAGGGTGAATGCCAAGGGCCTAAATGAGGGCTGTAAGTGGGTTGAAATGTTCGAAGATGTTCGAGCCGTGGTCTTTTGCGTTTCCCTAAGCGACTACGATCAGTTGTCGCTTTCCCCAGACAGTAGTGGCAGTGGAACACTTGTTCAAAACAAGATGGTACAAAGCAAGGAGCTTTTCGAGACGATGGTGAGGCACCCTTGCTTCAAAGACACCCCTTTGGTGCTAGTCCTTAACAAGTATGATATCTTTGAGGAAAAGATTAGCAGGGTGTCCCTAAATACATGTGAATGGTTCAGCGATTTTTGTCCAGTTCGTGCACACCATAATAACCAATCACTGGCCCATCAAGCCTACTTCTATGTTGCCATGAAATTCAAGGACCTTTATGCATCCCTCACAGGGAAAAAACTCTTTGTGGCACAAGCCAGGGCAAGGGACCGAGTAACTGTTGATGAGGCATTCAAGTACATAAAAGAGATCCTGAAATGGGATGAAGAGAAGGAGGAAAATTTCTATGGTCCACCTGAGGATTCATTTTACAGCACAGACATAAGCTCCTCTCCCTTTATCAGACAAGAGTGA 2583 0.4367 MDQNRGESWRELVKKMLPPGASIPADASNLDYSIAMEYVGPPVSYDVPRVEPFDANSRAIPTAQPLSGSQRSSTHGGHMVIEPIPLPVSRIAGVTSSPNQSPRVSGSSDSVVSVLQNPDLSSATPSASPASVHNPPSNPPKPGNEAKRAPVVTFNTVDRPQRKEVEVVKPVYSEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESRRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFNGKLSLDASNGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCALFSLPFPHGQPHGQKDETSHYTTVPNYLEQKKTQKLLLLGIQGSGTSTIFKQAKFLYGNRFSDEELQDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNGQGSPGQTMETGSNGEASNTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWRDPAIQETFKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFMEFSLDDRVPKSDTYLENLDAQLPPLTKYQLIRVNAKGLNEGCKWVEMFEDVRAVVFCVSLSDYDQLSLSPDSSGSGTLVQNKMVQSKELFETMVRHPCFKDTPLVLVLNKYDIFEEKISRVSLNTCEWFSDFCPVRAHHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARDRVTVDEAFKYIKEILKWDEEKEENFYGPPEDSFYSTDISSSPFIRQE* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0099 860 MobiDBLite consensus disorder prediction 60 76 - -
Gso1g0099 860 SUPERFAMILY FYVE/PHD zinc finger 167 233 IPR011011 -
Gso1g0099 860 MobiDBLite consensus disorder prediction 511 528 - -
Gso1g0099 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 834 IPR027417 -
Gso1g0099 860 CDD G-alpha 445 831 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 MobiDBLite consensus disorder prediction 92 131 - -
Gso1g0099 860 SUPERFAMILY Transducin (alpha subunit), insertion domain 472 624 IPR011025 GO:0007165
Gso1g0099 860 MobiDBLite consensus disorder prediction 59 151 - -
Gso1g0099 860 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 856 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 SMART galpha_1 426 817 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 MobiDBLite consensus disorder prediction 509 528 - -
Gso1g0099 860 MobiDBLite consensus disorder prediction 837 860 - -
Gso1g0099 860 Gene3D - 643 838 IPR027417 -
Gso1g0099 860 MobiDBLite consensus disorder prediction 846 860 - -
Gso1g0099 860 Pfam G-protein alpha subunit 441 827 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 PRINTS Alpha G protein (transducin) signature 446 461 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 PRINTS Alpha G protein (transducin) signature 614 636 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 PRINTS Alpha G protein (transducin) signature 687 715 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 PRINTS Alpha G protein (transducin) signature 740 749 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 ProSiteProfiles G-alpha domain profile. 443 839 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso1g0099 860 Gene3D - 473 625 IPR011025 GO:0007165
Gso1g0099 860 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 19 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0099 Gso-Chr1 1093661 1100703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0099 - - gmx:100794534 1724.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0099 1 1093661 1100703 Gso1g0099 1 1093661 1100703 ECH