Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0091 ATGAATCGCCACCACGATCCCAATCCCTTCGAAGAAGAAGAAGTCAATCCTTTTTCGAATGGCACTACTGCTCCTGCATCAAAGTCACGTATTCCACCATTAGCATCTGAGTCACTGGGCTTTGGTCAAAGGCATGATGCTACAGTTGATATTCCTTTGGATACTACAAATGACTCCAAGAAAAAAGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAGAAGAGAAGAGGCTGTTTCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATCATTCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAGAGGCTTCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTTTGCCTAGGTTTTAATGTAGTTGCTGTGACTGTCTGTTGGATTAGAGGCGGCGGTGTTAAAATTTTTTTCCTTGCGGTTATATATGCTCTACTTGGTGTTCCCCTTTCATATGTTCTTTGGTACAGACCCCTCTATCGTGCTATGAGGACGGACAGTGCACTGAAGTTTGGTTGGTTTTTCATGCTCTACTTGCTTCATATTGGATTTTGTATCTTTGCTGCAATTGCACCTCCCATTGTTTTTCATGGAAAATCATTAACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATCTGATTGGATTTGGCATGTTTTGCTTGGAGGCTCTTCTAAGCTTTTGGGTGCTTCAGAAAATATACATGTATTTCCGGGGGCATAAGTGA 810 0.4173 MNRHHDPNPFEEEEVNPFSNGTTAPASKSRIPPLASESLGFGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKRREKEIKRREEAVSRAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLGFNVVAVTVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMLYLLHIGFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSFWVLQKIYMYFRGHK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0091 269 Coils Coil 66 86 - -
Gso1g0091 269 Pfam SCAMP family 97 267 IPR007273 GO:0015031|GO:0016021
Gso1g0091 269 MobiDBLite consensus disorder prediction 1 59 - -
Gso1g0091 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 269 IPR007273 GO:0015031|GO:0016021
Gso1g0091 269 MobiDBLite consensus disorder prediction 15 29 - -
Gso1g0091 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0091 Gso-Chr1 1027700 1033344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0091 1 269 Miscellaneous Gene Families AT1G32050 74.539 1.54e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0091 K19995 - gmx:100780723 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0091 1 1027700 1033344 Gso1g0091 1 1027700 1033344 ECH
Gso1g0091 1 1027700 1033344 Gso9g1742 9 41868226 41874173 GST