Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0089 ATGGCAACCCTTGCAGACATTGGGGTCTCAGCTGCCATCAACATTCTCTCAGCCTTTGCCTTCTTGCTGGCTTTTGCTCTTCTGAGAATCCAACCCATCAATGATAGAATCTACTTTCCAAAGTGGTATATCAGTGGAGATAGAAGCAGTCCAAGGAGGTCTGGTGGAAATTTTGTGGGAAAATTTGTGAACCTCAATTTCAGAACTTACCTCACTTTCCTGAACTGGATGCCACAAGCTCTCAGAATGAGTGAGTCTGAGATTATTAGCCATGCTGGCCTTGACTCTGCTGCTTTCCTTAGAATCTATACTCTCGGCTTAAATATTTTTGTTCCAATCACACTTGTGGCACTCCTTGTACTTATACCAGTCAACGTATCAAGTGGGACATTATTTTTCCTAAAAAAGGAATTGGTAGTGAGTGATATTGATAAACTGTCAATATCAAATGTTCCACCTAAGTCTATAAGATTTTTTGTTCACATAGCATTGGAATACCTGTTCACAATATGGATTTGTTTTCTGCTGTACAAAGAATATGATCATATCGCATCAATGAGATTGCATTTCTTGGCCTCACAGCGGAGGCGTGTGGACCAATTCGCAGTAGTTGTCAGGAATATCCCTCATATGTCTGGCCATACAATATCAGATACCGTGGATAGCTTCTTTCAAACAAACCACCCAGAACATTATATAGGACACCAGGCTGTCTACAATGCAAATAAATTTGCTAAATTTGCAAAAAGAAGAGATAGACTCCAAAATTGGCTGGACTATTACCAGCTTAAGTTTGAGAGACATCCTGACAAGAGGCCAACTGTCAAGAATGGATTTTTAGGATTTTGGGGTGGGAAAGTTGATGCTATCGAGTACTACAAACATTCAATTAAGGAACTTGATACGATGATGACAATGGAACGTCAGAAAATTATAAAAGATCCCAAATCTATTTTGCCAGTTGCTTTTCTTTCATTCAAATCCCGATGGGGAGCATCAGTTTGTGCGCAAACCCAACAAAGCAAGAATCCTACACTCTGGCTGACTGATTGGGCCCCAGAGCCACGTGACGTATATTGGCAGAACTTGGCCATACCATTTGTTTCTTTAAACATTCGAAAGCTTATAATATCATTGTCTGTGTTTGCCTTGGTATTCTTCTACATGATTCCCATTGCTTTTGTGCAATCTCTTGCCAATTTGGAGGGTCTTGAAAGAGTTGCTCCTTTCCTCAGACCAGTTATAGAATTGAAATTCATCAAGTCCTTTCTACAAGGTTTTCTTCCTGGTTTGGCCCTTAAAATATTTTTGTACATTCTACCCACAGTTCTAATGATCATGTCAAAAATTGAGGGATATATTGCATTGTCAACACTTGAGCGGAAGACAGCAGCAAAATATTATTATTTTATGCTGGTGAATGTTTTCTTGGGAAGCATAGTGACTGGGACTGCATTTCAGCAACTGCATGCTTTCCTTCACCAGTCACCTACTCAGATTCCTAGAACGATTGGAGTTTCCATTCCAATGAAGGCTACCTTCTTTATGACATACATAATGGTTGATGGATGGGCTGGAATTGCTGGTGAGATTCTCAGATTAAAGCCATTGGTTATATACCATCTCAAAAACATGTTCTTAGTTAAAACCGAAAGAGATAGAGGAAAGGCCATGGACCCTGGGAGTGTGGACTTTCCAGAGACTATTCCAAGTCTTCAACTATACTTCCTTCTTGGAATTGTGTATGCTGTGGTGACACCAATCCTTCTTCCCTTCGTACTAGTCTTCTTTGCCTTTGCATATTTGGTTTACCGTCATCAGATAATCAATGTCTACAACCAACAGTATGAAAGTGCTGCTGCATTTTGGCCACTTGTTCACAGCCGCATTATCGCAAGCTTGCTAATATCCCAGCTTCTTCTGTTGGGTCTTCTTAGCACCAAAAAGGCAGCTAAATCCACACCTTTACTCGTCATATTACCAATATTGACATTTGCATTCCACAAGTTCTGCCAGAGACGTTTTGAGCCAGCATTTAGGAAGTACCCTCTTGAGGAAGCAATGTCAAAGGATTTATTGGAGAAGAGCACAGAACCTGACTTGAACATAGAGGCTTATTTGGCTGATGCTTACTTGCACCCAATCTTCAGGTCATTTGAGGTAGACGACGAATTGGTTGAAGTCAGAGTAGATAAACACCAAACTAATGTAGCTGATTCCCAACCAAGTGAGCCTAGTTCACCATCTCCACCACATCATGTGCAACAACCATCCCCACCCCATCATATCCATGAACCATCTCCACCTCAATATAGTGAGTATCAAACTTCACCACCAAGTTATTACTACCAATACCATCCTCCATCCCCACCCCATTATGTTTATCAATACTAA 2394 0.4073 MATLADIGVSAAINILSAFAFLLAFALLRIQPINDRIYFPKWYISGDRSSPRRSGGNFVGKFVNLNFRTYLTFLNWMPQALRMSESEIISHAGLDSAAFLRIYTLGLNIFVPITLVALLVLIPVNVSSGTLFFLKKELVVSDIDKLSISNVPPKSIRFFVHIALEYLFTIWICFLLYKEYDHIASMRLHFLASQRRRVDQFAVVVRNIPHMSGHTISDTVDSFFQTNHPEHYIGHQAVYNANKFAKFAKRRDRLQNWLDYYQLKFERHPDKRPTVKNGFLGFWGGKVDAIEYYKHSIKELDTMMTMERQKIIKDPKSILPVAFLSFKSRWGASVCAQTQQSKNPTLWLTDWAPEPRDVYWQNLAIPFVSLNIRKLIISLSVFALVFFYMIPIAFVQSLANLEGLERVAPFLRPVIELKFIKSFLQGFLPGLALKIFLYILPTVLMIMSKIEGYIALSTLERKTAAKYYYFMLVNVFLGSIVTGTAFQQLHAFLHQSPTQIPRTIGVSIPMKATFFMTYIMVDGWAGIAGEILRLKPLVIYHLKNMFLVKTERDRGKAMDPGSVDFPETIPSLQLYFLLGIVYAVVTPILLPFVLVFFAFAYLVYRHQIINVYNQQYESAAAFWPLVHSRIIASLLISQLLLLGLLSTKKAAKSTPLLVILPILTFAFHKFCQRRFEPAFRKYPLEEAMSKDLLEKSTEPDLNIEAYLADAYLHPIFRSFEVDDELVEVRVDKHQTNVADSQPSEPSSPSPPHHVQQPSPPHHIHEPSPPQYSEYQTSPPSYYYQYHPPSPPHYVYQY* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0089 797 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Gso1g0089 797 MobiDBLite consensus disorder prediction 735 785 - -
Gso1g0089 797 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
Gso1g0089 797 PANTHER TO DEHYDRATION PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 748 - -
Gso1g0089 797 MobiDBLite consensus disorder prediction 744 766 - -
Gso1g0089 797 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 748 IPR045122 GO:0005227
Gso1g0089 797 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0089 Gso-Chr1 1007106 1014037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0089 K21989 - gmx:100820282 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0089 1 1007106 1014037 Gso1g0089 1 1007106 1014037 ECH
Gso1g0089 1 1007106 1014037 Gso9g1744 9 41886896 41893504 GST