Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2090 ATGGAGAGCGTGGCATCCCCGATGATAACTTGTTCAAGCAACAACAACAATGGAAGTGGTAGTAATAATACTACTACTCCTAGCAGGTATGAGAACCAAAAGCGGCGAGACTGGAACACGTTCTGCCAGTACCTGCGGAACCAGCGGCCACCGCTATCGCTGGCGCTGTGCAGCGGGGCGCACGTGCTGGAATTCCTGCAGTACCTTGACCAATTCGGGAAGACAAAAGTGCACAACCCACCATGCCCCTTCTTTGGCCTCCCCAACCCTCCGGCGCCCTGCCCCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAAAACGGCGGCAGACCCGAAACCAACCCCTTCGGCGCACGCGCCGTCAGGCTCTACTTGCATGATGTTCGTGATTTTCAGGCCAAGGCCAGAGGAGTTAGCTACGAGAAGAAGAGAAAGAGGCCAAAACAACAAAACATTGCAAATGCAGCAACTAGTGTTACCACTTCCCCTAATAATGCCAATGCCACTGCCACTTAA 552 0.567 MESVASPMITCSSNNNNGSGSNNTTTPSRYENQKRRDWNTFCQYLRNQRPPLSLALCSGAHVLEFLQYLDQFGKTKVHNPPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRLYLHDVRDFQAKARGVSYEKKRKRPKQQNIANAATSVTTSPNNANATAT* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2090 183 PANTHER PROTEIN G1-LIKE2 6 164 IPR040222 -
Gso19g2090 183 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 6 164 - -
Gso19g2090 183 ProSiteProfiles ALOG domain profile. 29 156 IPR006936 -
Gso19g2090 183 MobiDBLite consensus disorder prediction 162 183 - -
Gso19g2090 183 MobiDBLite consensus disorder prediction 149 183 - -
Gso19g2090 183 MobiDBLite consensus disorder prediction 1 32 - -
Gso19g2090 183 Pfam ALOG domain 23 142 IPR006936 -
Gso19g2090 183 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2090 Gso-Chr19 49429011 49430373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2090 - - gmx:100786135 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1697 20 47603899 47605824 Gso19g2090 19 49429011 49430373 ECH
Gso19g2090 19 49429011 49430373 Gso19g2090 19 49429011 49430373 ECH
Gso19g2090 19 49429011 49430373 Gso3g2134 3 46596763 46598230 GST
Gso19g2090 19 49429011 49430373 Gso10g0320 10 3412087 3413883 PCT