Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1993 ATGCATTCATTCGGCTACAGAGCCAACGCGTTGCTAACCTTTGCCGTAACCATTCTGGCGCTTATGTGCGCTATGGCTTCTGTATCCGACAACTTCAACACCCCCACTCCCTCTGCACAAGTCCAGGTTCTGAACATCAACTGGTTTCAGAAACAACCCAATGGCAACGACGAGGTCAGCATGACGATGAATATTTCCGCAGACTTGCAGTCCCTTTTCACATGGAACACAAAACAGGTTTTTGTTTTTCTAGCTGCTGAGTATGAAACTCCTAAGAATTCCTTGAATCAGATATCCCTATGGGATGGTATCATTCCCTCTAAAGAGCATGCAAAGTTTTGGATTCATACATCAAATAAATACCGCTTCATCGACCAGGGGAGCAATTTGCGTGGCAAAGAATATAACCTGACTATGCATTGGCATGTTATGCCGAAGACTGGCAAAATGTTTGCTGATAAAATAGTCATGCCAGGTTATCGATTGCCTCAGGAATATAGATGA 504 0.4385 MHSFGYRANALLTFAVTILALMCAMASVSDNFNTPTPSAQVQVLNINWFQKQPNGNDEVSMTMNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNKYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1993 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
Gso19g1993 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
Gso19g1993 167 Pfam Signal peptidase subunit 1 165 IPR007653 GO:0005787|GO:0006465|GO:0016021
Gso19g1993 167 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 3 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1993 Gso-Chr19 48533893 48537460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1993 K12948 - gmx:100499788 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1993 19 48533893 48537460 Gso19g1993 19 48533893 48537460 ECH
Gso19g1993 19 48533893 48537460 Gso3g2034 3 45750005 45753597 GST