Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1917 ATGTCATTGTTCTTTTTAACACTGTCTCAGTCACCTGCTATTTCTCGGCCATGCTTCTGTTCACTGTCAATATGTGGGAGCAGCAAAGAAAACGGATTTCTTTGTGAATTCAATTTCCATGATCCTGTAGGTGAAAACTACGCTAATCCAAACACTTGCTTCTTTCATGTTCTCTTCAAGGCTGCGGCTTTGGCATTTTACATTCTCTCCGCCCTCTTCATTAATAACTTTGTCATCATTTTTATGATGACTGTCCTTCTCGCCGCTCTTGATTTTTGGGTAGTCAAAAATCTGAGTGGGAGAATTTTAGTTGGTTTGAGGTGGTGGAATGAAATCAATGATCTGGGTGAGAGTGTTTGGAAATTTGAGTCTCTTGATCAGCAGTCATTGGCTCGGATGAACAAGAAAGATTCATGGCTTTTCTGGTGGACGCTTTACCTTACAGCAGTTGCATGGACTATGCTGGCAATATTCTCTCTCATAAGGCTTCAAGCTGATTACCTCCTAGTTGTTGGAGTTTGTTTGACCCTCTGTATTGCAAATATTGTTGGTTTTACCGAATGCCAAAAGAGTATGCTAGTTTGTTGA 588 0.4065 MSLFFLTLSQSPAISRPCFCSLSICGSSKENGFLCEFNFHDPVGENYANPNTCFFHVLFKAAALAFYILSALFINNFVIIFMMTVLLAALDFWVVKNLSGRILVGLRWWNEINDLGESVWKFESLDQQSLARMNKKDSWLFWWTLYLTAVAWTMLAIFSLIRLQADYLLVVGVCLTLCIANIVGFTECQKSMLVC* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1917 195 Pfam Eukaryotic protein of unknown function (DUF846) 49 188 IPR008564 GO:0016021
Gso19g1917 195 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 40 191 - -
Gso19g1917 195 PANTHER UNCHARACTERIZED 40 191 IPR008564 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1917 Gso-Chr19 47876692 47878199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1917 - - gmx:100795312 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1917 19 47876692 47878199 Gso10g1330 10 39621886 39625163 PCT
Gso10g1330 10 39621886 39625163 Gso19g1917 19 47876692 47878199 PCT