Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1904 ATGAGAGGGGAGTTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGAAATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCTACAGAAAGCTTCATTCATTCCTTGGATGATAAGACAAGTGCATCATTGAAATTTACTGTATTGAACCCAAAAGGACGCATCTGGGCAATGGTAGCAGGAGGTGGTGTGAGTGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGCAACTATGCTGAATATAGTGGAGCTCCAAACGAGGAGGAGGTGTTGCAGTATGCAAGAGTTGTAATTGATTGTGCTACTGCAGATCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATAGCAAACTTCACTGATGTTGCTGCCACATTCAGCAGGATTATTCGAGCCCTGAAAGAGGAATCAAAGATTAAAGCAGCGCGAATGCACATCTATGTCAGAAGAGGTGGTCCAAACTACCAGACTGGTTTGGCAAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAATTCAGGTTTATGGACCAGAAGCCACAATGACGGGTATCTGCAAACAAGCTATTGATTGCATCATGTCCGACGCATAA 630 0.4508 MRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWAMVAGGGVSVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSRIIRALKEESKIKAARMHIYVRRGGPNYQTGLAKMRALGEELGVPIQVYGPEATMTGICKQAIDCIMSDA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1904 209 Gene3D - 27 208 IPR016102 -
Gso19g1904 209 PANTHER ATP-CITRATE SYNTHASE 1 209 - -
Gso19g1904 209 Pfam ATP citrate lyase citrate-binding 28 203 IPR032263 -
Gso19g1904 209 SUPERFAMILY Succinyl-CoA synthetase domains 46 189 IPR016102 -
Gso19g1904 209 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1904 Gso-Chr19 47763830 47766279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1904 1 206 Acyl Lipid Metabolism Gene Families AT1G09430 90.338 6.65e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1904 K01648 - gmx:100790560 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1904 19 47763830 47766279 Gso19g1904 19 47763830 47766279 ECH
Gso19g1904 19 47763830 47766279 Gso3g1941 3 44971375 44975060 GST