Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1903 ATGAGCAGCAACTCCGGAGCAGTTAAGGGAAGAGAATTCCCTCTTCCTCGCTGCCCCTGCCCCTCCTCAAATTCAAATGCCCCTTCCCTTGATCTCTGGTCACAAATCGTTGCCGCTGAAACGCCCCGCCCCGAACGAATCGACGTCGTTTACCGGAGAAGACACCCTCGCAATCCTCAAAACCACGCCAACTCAAAGCCTCCCGATTCTGCTATACCGCGCCCGCCTCGGCAGAGTTTGGCCGATCCAAACAAGCGAGTCAGTTGGAACCGTTCTCTTTCCACCCGAGGGAGGACAAGTATAGCCGTTGGGGCTTTTATGGTATACCAGCCTCAGTTGAAGAAGGACAAAAGGAAAGGAAAACCCGCTCTTCCCAAAGGAAAGGTTGTGCAACCTCCAAACGTTGACAAGGAGAGGATATACTTTCAAGAGGTTGATGCTTATGAGTTGTTGGAGGAAAGCCCCTCCCCCAAGAAAAGCACATGGACCATAGGAAATATGACACAACAGGAACCAATTCCAGCTGTATGCTCCAGATTAGAAAAATGGTTGCACTCTAGAAGGTTAAACCCCTTCTGCGGTCCATCTAGCACACTATCGAAGATACTGGATACTCCTTCCACACGTTTGGAAACTATTCGTGACATTGACTTCGGTGCTTCTGACTTGAAAACATTGGAACGAACTGACCGAAGCAATTCTCTTCTGCATACCATCAAAACTGAGGAGAAGGAAACTTCTATTGAGAATGGCAGTCATTTGCAAACAAATGAAAAGATGCTGTTTGCTCAAAGTGGTGAAGGATGTGAAGATATTGAAGCTGGTGTTAAGAAACTTTCTCTGGTATCAACGTCATCTTCAATAGATGATGACCACATTAATCCATTTTCTGTTTTATTATCGATTTGTGGACAGTCTGCACCTTCAGTGTTACAAGATATTTTCTCTAGTGGCTCAGAAACTATTGTGAAAGTTGGTGAAGGAACATATGGAGAAGCTTTCAAGATTAACAATTATGTCTGCAAAATAGTTCCTTTTGATGGGGAATTCAGAGTGAATGGGGAAGTCCAAAAGAGATCCGAAGAATTGCTGGAGGAAGTGCTTCTTTGCAAAACTCTCAATCAATTGAGAGGAAAAGATGGAGATTCTGATAATCTTTGCAGCGCATTCATAGATTGCATAGAATTTAGAGTATGTCAGGGCCCTTATGATGCGTCTCTAATTCAAGCATGGGAAGATTGGGATCTTGAGCATGGCTCAGAGAATGATCACCCAAAAGAGTTCCCAGATAAACAGTGTTATGTGGTGTTCGTACAAGAACATGGTGGCAAGGATCTTGAAAGTTTTGCACTCCTGAATTTTGACGAGGCAAGGGCTTTACTGGTTCAGGTTACGGCTGGGCTTGCTGTGGCTGAGTCTGCGTTTGAATTTGAACATCGAGATCTTCACTGGGGAAATATACTTGTGGGCCGAAGTGATTCTGAAACGTTGCAGTTCACTCTCGATGGCAAGACTATGTTGGTCAAAACTCATGGATTAATAATATCTATTATTGACTTCACTTTATCAAGAATAAACACAGGTGATAGCATACTGTATTTAGATCTTTCCTCTGATCCTGACCTATTTAAAGGACCGAAAGGGGACAAACAGTCAGAAACATATCGGAGGATGAAGGAGGTGACTGAAGATTGGTGGGAAGGAAGCTGTCCTAAAACAAACGTGTTATGGTTGATCTACTTGGTAGACATACTCCTCATGAAGAAATCATTTGAACGTACTACGAAGCACGAGAGAGATCTACGATCCTTGAAGAAACGTCTTGACAAGTATGATTCGGCCAAGGAAGCAATTCTTGATCCCTTCTTCACTGATTTGTTCGTTGAGTCTGACCCAAACTTAACAATCTAA 1911 0.4369 MSSNSGAVKGREFPLPRCPCPSSNSNAPSLDLWSQIVAAETPRPERIDVVYRRRHPRNPQNHANSKPPDSAIPRPPRQSLADPNKRVSWNRSLSTRGRTSIAVGAFMVYQPQLKKDKRKGKPALPKGKVVQPPNVDKERIYFQEVDAYELLEESPSPKKSTWTIGNMTQQEPIPAVCSRLEKWLHSRRLNPFCGPSSTLSKILDTPSTRLETIRDIDFGASDLKTLERTDRSNSLLHTIKTEEKETSIENGSHLQTNEKMLFAQSGEGCEDIEAGVKKLSLVSTSSSIDDDHINPFSVLLSICGQSAPSVLQDIFSSGSETIVKVGEGTYGEAFKINNYVCKIVPFDGEFRVNGEVQKRSEELLEEVLLCKTLNQLRGKDGDSDNLCSAFIDCIEFRVCQGPYDASLIQAWEDWDLEHGSENDHPKEFPDKQCYVVFVQEHGGKDLESFALLNFDEARALLVQVTAGLAVAESAFEFEHRDLHWGNILVGRSDSETLQFTLDGKTMLVKTHGLIISIIDFTLSRINTGDSILYLDLSSDPDLFKGPKGDKQSETYRRMKEVTEDWWEGSCPKTNVLWLIYLVDILLMKKSFERTTKHERDLRSLKKRLDKYDSAKEAILDPFFTDLFVESDPNLTI* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1903 636 Gene3D Transferase(Phosphotransferase) domain 1 442 623 - -
Gso19g1903 636 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 87 629 - -
Gso19g1903 636 SMART serkin_6 319 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1903 636 MobiDBLite consensus disorder prediction 51 93 - -
Gso19g1903 636 Gene3D Phosphorylase Kinase; domain 1 312 441 - -
Gso19g1903 636 ProSiteProfiles Protein kinase domain profile. 319 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1903 636 SUPERFAMILY Protein kinase-like (PK-like) 324 531 IPR011009 -
Gso19g1903 636 SMART DUF3635_2 540 623 IPR024604 -
Gso19g1903 636 MobiDBLite consensus disorder prediction 1 29 - -
Gso19g1903 636 Pfam Haspin like kinase domain 297 616 - -
Gso19g1903 636 PANTHER SERINE/THREONINE-PROTEIN KINASE HASPIN 87 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1903 Gso-Chr19 47749611 47756744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1903 K16315 - gmx:100790036 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1903 19 47749611 47756744 Gso19g1903 19 47749611 47756744 ECH
Gso19g1903 19 47749611 47756744 Gso3g1939 3 44946282 44950860 GST