Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1899 ATGGTGAAATCCCTGTTCCTGATTTCTCGAATCCCAATGTCTTCCACCACCATCCACCACAACGGCTCCCACATACCCAAAAAACCCAAACTCTCTTCCTTGGAAATCGAATCAGAATTCGGCCACCACGACTCCTCCGTCGCCCGCATCAACAACGGCAGCTTCGGGTGCTGCCCGGCCTCCATCCTCTCCGCTCAACGCCGCTGGCAGCTCCAGTACCTCCGCCAGCCCGACCACTTCTACTTCAACGACCTCAAATCCGCCGTCCTCCAATCCCGAACCTTAATCAAGGACCTCGTCAACGCCGACCACGTCGACGAGATCTCCATTGTTGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGCACACCGCCTGGAACTTCCGCGAAGGAAAGTTCCAGAAGGGTGACGTCGTCCTCATGCTCCACTACGCCTACGGCGCCGTTAAGAAATCCATGGAAGCCTACGTCACGCGCGCCGGAGGTAACGTCGTCGAGGTCCCGTTACCTTTCCCCGTTAATTCCAACGATGAGATCGTTTCCGAGTTTAGGAAAGCGTTAGAGAGAGGAAAGAGTAATGGGAATAGGGTTAGGTTAGCGGTAATTGATCATGTGACTTCCATGCCGTGTGTTGTTATTCCCGTTAAAGAGTTGATTCAGATTTGCAGGGAGGAAGGTGTGGACCAGGTTTTTGTTGACGCTGCACATTCCATTGGGTGTACTGATGTTGATATGAAGGAGATTGGTGCTGATTTTTATACTAGTAATTTGCATAAGTGGTTCTTTTGTCCACCTTCTATTGCGTTTTTGTACACTCGTAGGAACTTTAAAGGTACTGGTTCTGGTTCTGATTTGCATCACCCTGTGGTGTCTCATGAGTATGGCAATGGTTTGGCTGTGGAGAGTGCTTGGATTGGGACTAGGGATTATAGTGCTCAGTTGGTGGTTCCGGCCGCGGTGGAGTTTGTTAACCGGTTTGAAGGAGGGATTGAGGGGATCAAGAAGAGGAATCATGAGGCTGTTGTGGAGATGGGGGAGATGCTGGTGAAGGCGTGGGGGACTCGGCTTGGGAGTCCCCCACATATGTGTGCTAGCATGGTTATGGTTGGCTTGCCTGCTTGTTTGGGGATTGGGAGTGATTCTGATGCCCTAAAGTTGAGGACACATTTCAGGGATACTTTTGGGGTTGAGGTTCCGATATACTATCGGCCCCCAAAAGAAGGGGAAGTTGGGGTGGTTACTGGATATGCCAGGATTTCTCATCAAGTGTATAACAAGGTTGATGACTATTACAAGTTCAGGGATGCAGTTAACCAGCTTGTGCAAAATGGGTTCACTTGTGCTGTTCTTTCGGATTGA 1362 0.5081 MVKSLFLISRIPMSSTTIHHNGSHIPKKPKLSSLEIESEFGHHDSSVARINNGSFGCCPASILSAQRRWQLQYLRQPDHFYFNDLKSAVLQSRTLIKDLVNADHVDEISIVDNATTAAAIVLQHTAWNFREGKFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGKSNGNRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRRNFKGTGSGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAAVEFVNRFEGGIEGIKKRNHEAVVEMGEMLVKAWGTRLGSPPHMCASMVMVGLPACLGIGSDSDALKLRTHFRDTFGVEVPIYYRPPKEGEVGVVTGYARISHQVYNKVDDYYKFRDAVNQLVQNGFTCAVLSD* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1899 453 PANTHER L-CYSTEINE DESULFHYDRASE 30 452 - -
Gso19g1899 453 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 30 452 - -
Gso19g1899 453 Pfam Aminotransferase class-V 83 359 IPR000192 -
Gso19g1899 453 SUPERFAMILY PLP-dependent transferases 43 443 IPR015424 -
Gso19g1899 453 Gene3D - 71 326 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1899 Gso-Chr19 47727153 47730133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1899 K22207 - gmx:100793745 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1899 19 47727153 47730133 Gso19g1899 19 47727153 47730133 ECH
Gso19g1899 19 47727153 47730133 Gso3g1936 3 44915496 44919262 GST