Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1871 ATGGAATCAGCTACGAATTTGAGGGTTAGGGATTTCATAGCAAAGGAAGTTGCTGATTGGGACGACGAATTGATTGCAGTTGCTCGATTCAAAGCCTTTTCCGGTCAAAGATGCGATTGGGAACCCACCTTCCGCTTCTGGAAACACTTCATCATCAAAATCGCCACCCATTTTGGCCTCCTCCTCATTCGACCCTCCCAGGTCAAGAATGATTGGTTTAATCGAGGAGGGTTAACCCCTTTGTGTCTTGACGATGTACTGTCTCTAATGTATAATGAAGGTGACATCACAAGAACTGTGGATCTTGAGGATCCAACGAGCGGGCGATTCTCCCAACTAGTCAGAAGAGTGGGTAACTTGATAACAAGGCCACCGACTCCAGATATTATGGCTGAACAATGTGTTATCGTAACTGCTATGCTTAAGGATAAGGCTGCTGAAGTTGTCAAACATCTATCTGAAAGTCACTGGAATTCATCTTGTATCGTTACAATGAAGAAATTTCAGGACATGTGTGGAGGACCGGATGAGGCATCTGTAATGTTGAGGTATCTGTCTGGGTGTAGAACAGCACAGTATCTATCAGTGAATAAGAAAGATTTTTTAGAGGGGGTAAAAGTTTCTCTCTCAGCAGGAGCATTATCTAGTATCACTAATTTAGATTATGATGTACTGCACTTGATTTGGACCACTGAGAAGCTTCAGCTACAACTGGATGTGACTGATAGGCGTTATGAATTGTTGAGAAAATCAGCATTGGCTTCTCTACAATCTGGGAACAAAAAATTGGCCCTTAACTATGCAAGGGAGCTGAAGTTAGTCACCCAGAGTAGAGAAAAATGTTCATCACTTTTGAACAGAGTAGAGGAAGTACTTAGCGTTATTGCCGATGCCGAGTCAACAAAAAAGGTTACTGAAGCTATGCAGATTGGAGCCCGGGCTATTAAAGAAAATAAGATCAGCGTGGAAGATGTTGATCTTTGTTTAAGAGATATCCAAGAGAGCATTGATTCACACAAGGAAGTTGAGAATGCCCTAGAACGAATGCCATCATATGTGGATATTGAGGATGAAGATATTGAAGAGGAATTCAAGAAGTTGGAGCTGGCTGTTGGGCAAGATGCTCAAGTTCCTGCACTGGAGAAGGCATTCAATGAAGAAGGAAGAATGGCTTCAGAAGCTGCTGATTTTATTAGTGACACTTTCTCAAATCTCAAGCTTTCAGATCGTCCAGCTGAGAAGCCAGGAATCACTCAGGCAGTGTCAGAGGGAGACAAAATAACAAAAAAATTAGAAATGGAAGCGGTGTAA 1311 0.4226 MESATNLRVRDFIAKEVADWDDELIAVARFKAFSGQRCDWEPTFRFWKHFIIKIATHFGLLLIRPSQVKNDWFNRGGLTPLCLDDVLSLMYNEGDITRTVDLEDPTSGRFSQLVRRVGNLITRPPTPDIMAEQCVIVTAMLKDKAAEVVKHLSESHWNSSCIVTMKKFQDMCGGPDEASVMLRYLSGCRTAQYLSVNKKDFLEGVKVSLSAGALSSITNLDYDVLHLIWTTEKLQLQLDVTDRRYELLRKSALASLQSGNKKLALNYARELKLVTQSREKCSSLLNRVEEVLSVIADAESTKKVTEAMQIGARAIKENKISVEDVDLCLRDIQESIDSHKEVENALERMPSYVDIEDEDIEEEFKKLELAVGQDAQVPALEKAFNEEGRMASEAADFISDTFSNLKLSDRPAEKPGITQAVSEGDKITKKLEMEAV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1871 436 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 106 413 IPR005024 GO:0007034
Gso19g1871 436 Pfam Snf7 231 376 IPR005024 GO:0007034
Gso19g1871 436 PANTHER SNF7 FAMILY PROTEIN 106 413 - -
Gso19g1871 436 Gene3D - 229 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1871 Gso-Chr19 47406280 47409626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1871 K15053 - gmx:100783674 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1871 19 47406280 47409626 Gso3g1907 3 44609876 44611505 GST