Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1857 ATGGCAGTCGCTATGGCTATAATGACCAAGCAGCATCTGCTGACCTACATCTACCTTCTAGTTTACATTTCACTTTCATCAGGGGTTATTCTGTACAACAAGTGGGTCCTCTCCACATTGTATTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGTGCGGTGGCCTTTTTCCTTATCCGTGTTTTGAAGGTTGTGTCGCCAATTAAAATGACCTTCCATATATATGCAACTTGTGTGGTCCCTATAAGTGCCTTCTTTGCAGCTAGTCTGTGGTTTGGGAATACTGCTTATTTGTACATTTCAGTGGCCTTCATCCAGATGCTTAAAGCCCTGATGCCAGTAGCAACATTTGTTGTGGCCGTTACTTGTGGAACTGAGAAATTAAGGTGTGATGTATTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTATGGGGAAATTCATTTTAATGTGCTTGGTACAGTTTATCAGGTCACGGGAATAGTTGCTGAAGCTTTAAGACTGGTTTTAACTCAAGTTCTTCTTCAAAAGAAGGGCCTGACACTAAACCCTATTACTAGCTTGTATTACATAGCACCTTGCAGCTTTGCATTTCTTTTTATCCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGATCCACATATGCAGTTTAACTTCTGGGTATTTTTCTCGAATGCACTTTGTGCTTTCGCATTGAATCTTTCCACATTTTTAGTGATTGGCAGAACTGGGGCAGTAACTATTCGGGTGGCTGGAGTTTTGAAAGACTGGTTACTTATCACTCTTTCAACTGTCTTATTTCCTGAATCAAAGATTACCGGGCTTAATGTTATTGGCTATGCTATTGCTTTAAGTGGTGTTGTTTTTTACAACTACCTTAAGGTCAGGGATGTTCGCACATCTCAACTTCAAAGTATCCAAGATGAATCAGCAAAGGAGCTGCAGACGGAGAAGAAAGCAGATGATGCCATGGACAACAAAGATGAGGCTTCATGGAATGATTCAGTTTCTGATACTCATTTAGATGAAGAAGCACCTCTAATCTCTTCGCGGATATCTCATTTTGGAGTTGGAAGAAAGCCAGCTTAG 1125 0.408 MAVAMAIMTKQHLLTYIYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFFLIRVLKVVSPIKMTFHIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFVVAVTCGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVLGTVYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFAFLFIPWYILEKPEMEDPHMQFNFWVFFSNALCAFALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNVIGYAIALSGVVFYNYLKVRDVRTSQLQSIQDESAKELQTEKKADDAMDNKDEASWNDSVSDTHLDEEAPLISSRISHFGVGRKPA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1857 374 PANTHER SOLUTE CARRIER FAMILY 35 1 354 - -
Gso19g1857 374 MobiDBLite consensus disorder prediction 322 357 - -
Gso19g1857 374 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 354 - -
Gso19g1857 374 Pfam Triose-phosphate Transporter family 17 303 IPR004853 -
Gso19g1857 374 MobiDBLite consensus disorder prediction 323 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1857 Gso-Chr19 47262107 47267675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1857 7 368 Organic Solute Cotransporters AT3G17430 75.275 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1857 - - gmx:100779373 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1857 19 47262107 47267675 Gso3g1892 3 44463636 44468817 GST