Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1854 ATGGATTCGGCGAACGGAACAACTGCGGTGGAGGAACAACGGTTAACTGAACGGAGCATGCACCGTGGCCCCTATCTCGGTGACATCTCAGCTCTCTGTTTTCTTCGCATTCCCAATCTCTCTCTTCCTTTTCTTCTCGCCGGTCTGGGTTCGGAAATTACGTTGTACGATTTAGAACTGAGTAAGAGAGTAAGATCCTTCTCTGTATTCGAAGGAGTTCGCGTCCACGGAATCGCTTCTAGTTTCCCTCAAGAGAATGTAATTGCTGTGTTTGGGGAAACGAGAGTGAAACTGTTTAGCTTCGCATTTGATAGCGCTTCTCGGAGTCCAGAGTTGACGTTCGTTCATTTGTTGCCCAAGTTTGGTCACTGGGTTTTGGATGTTTCCTTCCTCAAGGGATCCTTACCTCATTCCAATGTGGAGAGTGAGTTTCTTGCTGTAGGATGTAGCGACAATTCAGTTCACGTTTGGGATATTTCTAACTCTAAAATGGTTCTTAAGGTTCAATCTCCAGTGCGGTGCCTTCTGTACTCAATGCGATTATGGGGTCACAATCTTGAAGTTTTCCGAATTGCGTCTGGTACAATATTTAATGAGATTATTGTTTGGAAAGTTGCCCCTCAACATAATAAATCTTCAAGTCATCAAGAAAACCATTATCATCAGAGCATTTCATCCTCCAATTGCTGTCAGATAAAGGATCAACTGTATGAGGCTATTCATGTATGTAAACTTATTGGACATGAAGGTTCAATATTCCGAATAGCATGGTCGTCTTGTGGATCTAAACTGATATCTGTCTCTGATGACCGGAGTGCACGTGTCTGGGCTGTTGCTACTGAAAGGGAGCATTCATTGTGCCATGATCCTGTTGCCCTTGTCTTATTTGGACATTATGCTCGGGTTTGGGACTGCTGTATGTATGATAACTTGATTGTCACTGTCAGTGAGGATTGTACATGTCGTATATGGGGAGTTGATGGTAAACAACTGCAAGTTATTAAGGAGCACATTGGAAGGGGTATATGGAGATGTTTGTACGACCCAAATTCATCACTTCTTATAACTGCTGGCTTTGACTCTGCTATTAAAGTACATCAACCTCGTGCTTCTCTGCCCAGGGGCTTGGAAGCAGCACAAGGGTCCCCTGGTAGGACAGAGATGTTTTCCATTTGCATCCCTAATGTGTTGAATCATAGTGGATTTATGGACAGCAAGAGTGAATATGTTCGATGTTTGCGCTTTTCCTGTCAGGATTCTCTTTATGTTGCTACCAATCATGGTTATCTCTACCTTGCTAAATTATGTGATACTGGTGGTGCTCAGTGGAATCAACTTGTCCAGGTCAGCAATGGAGCACCAATTATCTGCATGGATTTATTGTCCAAGGACTCTTTTGAACTTGACTGTGGTGCTGAGGATTGGATTGCTATTGGAGATGGTAAAGGAAATATGACAGTTATTGGAGTTTCTAACGATGATTGTACTCCTACTGTGAGATTGTGCTTTACTTGGCCTGCTGAAATGGAGAGACAGCTCTTGGGTACTTATTGGTGTAAATCTCTGGGATGTAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTCTGGAGGTTGCCTGACCCTTCACAATCTGATCTTCCGAGCTCCATGAGGAGTAACAACGTATCATGTATAGCAGAGTTCACATCAAATTATGGAATGCGGATAATGTGTTTGGATGCATGCATGGAGGAAGAGGTCCTAGCATGTGGAGATGTACGTGGCAATATGGTCCTGTTCCCTTTGCTAAAGAATCTGGTGCTGGGCATATCTGCTGCACAAGAAATGAAGATACCTCCAGTAAATCATTTCAAAGGAGTTCATGGGATTTCAAGTGTCTCCAGTGTTTCTGTGACTAAGCTTGGTTATAATCAGATTGAGATATGTTCAACTGGAGCAGATGGCTGTATATGCTATCTGGAATTTGATAAAGAAATGCAGAATTTGCAATTTACGGGGATGAAACAAGTGAAAGGGTTATCTTTGATTGAATATGTTTCTGTGGATAACAACTCCGGTGATAAATTGTCAAGCAGTTATGCTGCTGGTTTTGCATCAGTGGATTTCATAGTATGGAACTTAGCTAATGAGAATAAGGTGGTGAACATTCCATGTGGTGGATGGCGACGTCCTCATTCCTATTATCTAGGTGATATACCAGAGATGAAGAACTGCTTTGCCTTTATCAAGGATGAAATGATAAATATACATAGACACTGGATTCATAATAGAGATGGGAAGGTATATCCTCAAAGTTTGCACATGCAGTTCCACGGTAGAGAGATACATTCCTTGTGCTTTATCTCTGATGATGTGCTTGTTGGAGATAATTATAAGTGTGCCTTATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAAGATGGAACTGTGAGGTTGACATGGTACTCTCCAGGTATTGAAAATTGGTCTACATCAAAACTGCTTGGTGAACATGTTGGAGGATCGGCGGTAAGATCAATTTGTTGTGTGTCAAAAGTATACACCATTTCATCAGATACGGGCAATGTACCTGATGGGAGGATTGAACTGAATGCTGCTGTTGAGAACAATGATAACCCAACATTACTAATATCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGATATTAAAAAATAGGAGGCTGGACAACAAAAATGACTTCGTAACTGATCATCAGTGTAATTCAGAAGGAGTTGATGATCAGTTTTTGTCAAATTTTTCCTCATCAATGACGTTCCAGTGGCTTTCCACTGATATGCCCGCCAAATATTCAATTACACACAATACTCCCGAAAATAATGTGGAGAAAATAGTTGGTATTGCTGAAAATGTTTCTAATACAAATAGTGATGCTAGAATGGGATCTCTGGTTTCTGAGAGCAGAACGGCAAACTTGATCAGAGATAAGCATGAAGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTTCTGGTTCCAGGATATCTGTCTGTTTTGTTGTTGTTGCATGTTCAGATGCTACACTTGTGTTACGAGCTTTAGTTTTGCCCTTTCGCTTGTGGTTTGGGGTTGCTTTACTGGTTCCTTTATTGGCACCTGTTTTATCATTGCAGCATATAATCTTTCCCATGTGTAGGCCTCATAAAGAAAACATTCAAGTTGGAAATGTTTATATTGTGATTAGTGGGTCTACTGATGGAAGTGTTGCTTTTTGGGACCTAACTGATAGTGTTGAAGCTTTTATGCAGCAAGTTTCAGTTTGTAATGTTGAAAATTTTTTTGATTGCCAAAAACGACCACGCACAGGCAGAGGAAGTCAGGGTGGAAGACAGTGGAGATCTTTAAGCAGAGACTTATCAAAGAAAAGACAAGACGGCAAACTGGTCACTTTGAAAGCCGAAGACAGGACCCAAAGCATCAGTTATGCTACACAGGGGACCTCTTACATGCCAAGCAGTTCTGCTGACTGTGAGATGGTTTGTTCTCAATCTACACATATGGTTCCCCCAGAGTTAGAAAGCAAGACTGATAATTTGTCAGTGGAAATATGTGAAATACGGCCTCTATGCCGTTTGCAAAATATTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAGGGTGGGCAAATTACTGATAATTGTCATGTGTACAGCATAGTTACCGGGGGTGATGATCAAGCACTTCATCATCTCATGGTTGAATTATCACCTAAATCAATAAATTCAAGTGAAGGAATTTTGATCCCAGACATCATACATTTCGTCTCTGTACCTGAACATGGAAAGGACATCAATTTACAAAGTCAGAGCAAGAATTATAAGATTAAATTCTTAAATTACCAAAAATTACCCTCTGCCCACAGCTCTTCTGTCAAAGGTGTCTGGACAGATGGATCTTGGGTGTTTTCGACTGGACTTGATCAGCGGATCAGATGCTGGCATCTTCTGCAGAGCAAACTAATTGAGCATTCATATCTAATAGTTAGTGTGCCAGAGCCAGAAGCGTTATCTGCTAGGGCTTGTGGCAGGAACCATTATCAAATTGCTGTTGCTGGAAGAGGGATGCAAATAATTGAATTTTCTGAATCTTTAAAGAAGATTGGTGACTAG 4161 0.4117 MDSANGTTAVEEQRLTERSMHRGPYLGDISALCFLRIPNLSLPFLLAGLGSEITLYDLELSKRVRSFSVFEGVRVHGIASSFPQENVIAVFGETRVKLFSFAFDSASRSPELTFVHLLPKFGHWVLDVSFLKGSLPHSNVESEFLAVGCSDNSVHVWDISNSKMVLKVQSPVRCLLYSMRLWGHNLEVFRIASGTIFNEIIVWKVAPQHNKSSSHQENHYHQSISSSNCCQIKDQLYEAIHVCKLIGHEGSIFRIAWSSCGSKLISVSDDRSARVWAVATEREHSLCHDPVALVLFGHYARVWDCCMYDNLIVTVSEDCTCRIWGVDGKQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHQPRASLPRGLEAAQGSPGRTEMFSICIPNVLNHSGFMDSKSEYVRCLRFSCQDSLYVATNHGYLYLAKLCDTGGAQWNQLVQVSNGAPIICMDLLSKDSFELDCGAEDWIAIGDGKGNMTVIGVSNDDCTPTVRLCFTWPAEMERQLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPSQSDLPSSMRSNNVSCIAEFTSNYGMRIMCLDACMEEEVLACGDVRGNMVLFPLLKNLVLGISAAQEMKIPPVNHFKGVHGISSVSSVSVTKLGYNQIEICSTGADGCICYLEFDKEMQNLQFTGMKQVKGLSLIEYVSVDNNSGDKLSSSYAAGFASVDFIVWNLANENKVVNIPCGGWRRPHSYYLGDIPEMKNCFAFIKDEMINIHRHWIHNRDGKVYPQSLHMQFHGREIHSLCFISDDVLVGDNYKCALFSKSSWIATGCEDGTVRLTWYSPGIENWSTSKLLGEHVGGSAVRSICCVSKVYTISSDTGNVPDGRIELNAAVENNDNPTLLISVGAKRVLTSWILKNRRLDNKNDFVTDHQCNSEGVDDQFLSNFSSSMTFQWLSTDMPAKYSITHNTPENNVEKIVGIAENVSNTNSDARMGSLVSESRTANLIRDKHEDDWRYLAVTAFLVKCSGSRISVCFVVVACSDATLVLRALVLPFRLWFGVALLVPLLAPVLSLQHIIFPMCRPHKENIQVGNVYIVISGSTDGSVAFWDLTDSVEAFMQQVSVCNVENFFDCQKRPRTGRGSQGGRQWRSLSRDLSKKRQDGKLVTLKAEDRTQSISYATQGTSYMPSSSADCEMVCSQSTHMVPPELESKTDNLSVEICEIRPLCRLQNIHQSGVNCLHVSEIKGGQITDNCHVYSIVTGGDDQALHHLMVELSPKSINSSEGILIPDIIHFVSVPEHGKDINLQSQSKNYKIKFLNYQKLPSAHSSSVKGVWTDGSWVFSTGLDQRIRCWHLLQSKLIEHSYLIVSVPEPEALSARACGRNHYQIAVAGRGMQIIEFSESLKKIGD* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1854 1386 Gene3D - 12 238 IPR015943 GO:0005515
Gso19g1854 1386 Pfam WD domain, G-beta repeat 244 276 IPR001680 GO:0005515
Gso19g1854 1386 Gene3D - 1064 1352 IPR015943 GO:0005515
Gso19g1854 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 1074 1096 IPR001680 GO:0005515
Gso19g1854 1386 SUPERFAMILY WD40 repeat-like 49 592 IPR036322 GO:0005515
Gso19g1854 1386 Gene3D - 239 293 IPR015943 GO:0005515
Gso19g1854 1386 MobiDBLite consensus disorder prediction 1115 1137 - -
Gso19g1854 1386 Gene3D - 607 922 IPR015943 GO:0005515
Gso19g1854 1386 PANTHER WD REPEAT PROTEIN 20 1378 - -
Gso19g1854 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 141 167 IPR001680 GO:0005515
Gso19g1854 1386 Gene3D - 308 601 IPR015943 GO:0005515
Gso19g1854 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 286 IPR001680 GO:0005515
Gso19g1854 1386 SUPERFAMILY WD40 repeat-like 1073 1338 IPR036322 GO:0005515
Gso19g1854 1386 SMART WD40_4 613 657 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 238 277 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 498 540 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 288 325 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 557 597 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 1052 1087 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 765 818 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 1293 1331 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 1199 1249 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 327 367 IPR001680 GO:0005515
Gso19g1854 1386 SMART WD40_4 111 158 IPR001680 GO:0005515
Gso19g1854 1386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 276 - -
Gso19g1854 1386 SUPERFAMILY WD40 repeat-like 524 847 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1854 K24737 - gmx:100780968 2801.54