Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1839 ATGGCCATGGCAACTCTAACCCCAATGTGTTGCTCATGTTCAACACCCAGATTCAGTGGTCAACACCATCAGCATGGCTATCAACTAAAACTAAAACCCTCAGTTTTGAATTTCAGACCTCAGAAGCAAAATAGAAGCATCAGAATCCGATCACCCTCTGCCTCCAACCCGAACCAGAATGAGTCTTCTTCTCCCGGATTATACTCTGCCAAGAAATTCGACCTCACCGCATCCAACGTCGACCTCGTTCTCGACGATGTTCGCCCTTACCTCATCGCCGACGGCGGCAACGTGGACGTGGTGTCGGTGGAAGACGGCGTGGTATCTCTCCGTCTCGAAGGAGCATGCGAGAGCTGCCCCAGCTCCACCACCACCATGACCATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGAGACGCTGTTAAGGACATACGCCAAGTCTACCTTACCGAACCAAGGGAGACAACGGTTGAGGCGGTGAATAATCATCTTGAGATATTGAGGCCGGCCATTAAGAATTACGGAGGGAGCGTGGAAGTGGTGTCCGTAGAAGGCGGGGAGTGCGAGGTAAAGTATGTTGGACCTGACTCCATTGGATCCGGAATCAAAGCAACCATCAAGGAGAAGTTTCCAGATATTCTCAATGTTACCTTCACCACCACCACTTAG 672 0.5089 MAMATLTPMCCSCSTPRFSGQHHQHGYQLKLKPSVLNFRPQKQNRSIRIRSPSASNPNQNESSSPGLYSAKKFDLTASNVDLVLDDVRPYLIADGGNVDVVSVEDGVVSLRLEGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYLTEPRETTVEAVNNHLEILRPAIKNYGGSVEVVSVEGGECEVKYVGPDSIGSGIKATIKEKFPDILNVTFTTTT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1839 223 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 41 220 - -
Gso19g1839 223 Pfam NifU-like domain 80 140 IPR001075 GO:0005506|GO:0016226|GO:0051536
Gso19g1839 223 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 155 220 IPR034904 -
Gso19g1839 223 MobiDBLite consensus disorder prediction 41 67 - -
Gso19g1839 223 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 41 220 - -
Gso19g1839 223 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 78 142 IPR034904 -
Gso19g1839 223 Gene3D - 72 156 IPR034904 -
Gso19g1839 223 Gene3D - 157 219 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1839 Gso-Chr19 47107260 47108199 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1839 K22074 - gmx:100527356 415.616