Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1835 ATGGCTAATAGACCGGATCCGGATATTGATGATGATTTTCGTGAGCTTTATAAGGAGTACACTGGCCCCCTGGGGACTGCTACTACAAACATGCAAGAGAGGGCAAAATCAAATAAGAGGTCTAATGCAGGGTCTGACGAGGAGGAGGAAGCCCGGGACCCTAATGCTGTTCCAACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACGGAAAGGAATTGGAAGAAAAGGAAAGAGGAGGAAATGATCTGCAAGCTTTGTGGAGAATCAGGGCATTTCACTCAGGGCTGTCCATCTACTCTCGGAGCAAATCGAAAGTCTCAAGATTTCTTTGAAAGGATACCTGCCAGAGACAAAAATGTACGGGCACTTTTCACAGAGAAAGTTTTAAGCAAGATTGAAAAGGATGTTGGCTGCAAAATTAAGATGGATGAGAAGTTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCCAAAGGTGTTGATGCTGTGCACAAGATTCGAGAGGAGGGTGATCAAAGGGGATCATCTAGTTCTCAAATGACCCAATCAAGATCACCTGAAAGAAGTCCTGTTAGTGCTCGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCACGAAATACATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGCTGTTGAAGACCGTATCAGGGATGATGTTCAAAAGTTTTCTAGAGGTTCTCCACAAGCAAGAGCTTATGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCAGTCAAGATCTCCAAGGCATGCCCCTTATACAGGAAACTCATATAATTCATTTGATGATCGTAATCAAAACATGGGTGCTTATAGGAATGAAGGATGGGATTCTCATAGAAGAGAATCTGGTATCCAGCCTGGTCATCAGTTTGATTACAACGCCTCCCCACAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAACGAGGCAACAGAGCTAATGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAGCAAAGTTTCCTTGGTAAGGGTCACACATGCAAAACAGTTGGAAGAATTTCTTCAGCTTGATGCGCAGAGGCGTCGACAGCAAGTGGGTCAACAGATGTCTTCTGGTTATCGGGGTTTTAAACAGCAGAGTTTTCCTGAATATGATGGGTCCACTGCCAATCCTCCTACTTATGCTGGTTCTAATATACCATTGGAATCGAGGAACAGGTTCTCAGGCAACATGGAAACTTATCCTAATAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1392 0.431 MANRPDPDIDDDFRELYKEYTGPLGTATTNMQERAKSNKRSNAGSDEEEEARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIEKDVGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGDQRGSSSSQMTQSRSPERSPVSARFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRIRDDVQKFSRGSPQARAYGNSGARGRSSQSRSPRHAPYTGNSYNSFDDRNQNMGAYRNEGWDSHRRESGIQPGHQFDYNASPQTLEELELEYKNEATELMKIRDREEDEENFKHREAIRDLREKYMSKVSLVRVTHAKQLEEFLQLDAQRRRQQVGQQMSSGYRGFKQQSFPEYDGSTANPPTYAGSNIPLESRNRFSGNMETYPNRPHDNFGEFHRRGDFAKAYNRY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1835 463 MobiDBLite consensus disorder prediction 227 244 - -
Gso19g1835 463 MobiDBLite consensus disorder prediction 39 55 - -
Gso19g1835 463 MobiDBLite consensus disorder prediction 181 226 - -
Gso19g1835 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Gso19g1835 463 MobiDBLite consensus disorder prediction 1 65 - -
Gso19g1835 463 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Gso19g1835 463 MobiDBLite consensus disorder prediction 1 18 - -
Gso19g1835 463 MobiDBLite consensus disorder prediction 23 38 - -
Gso19g1835 463 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Gso19g1835 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Gso19g1835 463 Coils Coil 320 340 - -
Gso19g1835 463 MobiDBLite consensus disorder prediction 175 286 - -
Gso19g1835 463 MobiDBLite consensus disorder prediction 248 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1835 Gso-Chr19 47072231 47076520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1835 - - gmx:100816979 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1835 19 47072231 47076520 Gso3g1872 3 44284342 44288570 GST