Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1830 ATGTCGATCGGAGATGCTTTTCTATGCTTACTATTCATAGCAACTTGTTCGATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGTGGATTTGTCGAGGCGAGCTCATCGTTGGTGAAGTCGAGGAAACAAACTGATGTCAAATTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTGGTTGACAATAATGGTTGCAATGGCAATGAAGATATAAACTTCCGTTTCACAGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTTGGGGGAGAAAGTTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGAACTTTTGTCCCTTTCGGGGGATCTTGTCTCTTCAGTCTTAACTTCATCGTCAGGGAGTTACTTGTTTACAAATATAATTCCAGGAAAATATGAACTACGCGCTTCAAATCCTGATATGAAAGTTGAAGTTAAAGGTTCAACACAGGTTGAATTGGGCTTTGGAAATGGGGTAGTTGATGATATTTTCTTTGTCCCTGGGTATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCAATATTAGGAGTTTATATTTTCTTACATTCAGATGATGTTTCTGAAGTAGAGTGTTTGAAAGGTTCTGCTAATGGTCCACGACAAGGAGTAGCTCTCTGTCATGCTGTATCAGATGCTGATGGGAAGTTCACATTCAATTCAATACCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCGCCACCCAGCGTCTCAGTTAATGTTAAGCACCAGCATGCAACAGTGCCTCAAAAGTTTCAGGTAACTGGATTTTCTGTTGGAGGCCGTGTAGTTGATGGAAATGGCATGGGAGTGGAGGGGGTCAAAATCATAGTTGATGGTCATGTAAGGTCTATTGCTGACAATCAAGGATATTACAAGCTTGATCAGGTTACATCCACGCACTATACCATAGAGGCCCAAAAGGAGCATTACAAATTCAAGAAATTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATCAATGCCATTTCATACAATCTTTGTGGTTTGGTTAGGATGGCTAGTGGTGGTCTGAAAGCGAAGGTGGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTTCCTCCTGGTGAATATCGCTTGTCAGCCATTGCTGCTACTCCTGAGAATGGTGCTGGACTCATGTTTGCTCCATCTTATATTGATGTTGTGGTCAAAAGTCCCCTGTTGAATATTGAATTTTCACAAGCTTTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGCCCATTTGTATCCGTTACTCTGGTGAGACAGGTTGATAAACACAATGAAGAGAGAAAGACAATTAGCTTGACCACCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGCCTTGAGGTCAAACATAGTTCCCCTGAATCAGTGACCTTGGAAGATAATTGGTGCTGGGAACAGAGCTTCATAGATGTAAATGTTGGTGCTGAGGACTTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATATTATCTCCACTCACAATGTTGATGGTTACCTGACTCAACCCGATGGGTCAAATGTGAATTTTAAAATTCAGAAAGGTTCTCAGCATATATGTGTAGAACAACCTGGCGTACATGAATTTCATTTTGTTGACTCGTGTATCTTCTTTGGGAGTTCATCAGTGAAAATTAATACATCTGATCAATCACCCATCCATCTAACAGGAGAGAAGTATCTTCTCAATGGACAAATAAATGTGCAGTCTGGCTCACTTGATGCATTGCCTGATAGTATAGTTGTTGATATTAAACATGATAGAACTGGTGTTATTGATTATGCTACAGCCATACTTAAGTCCCATGTGAAAGATGAAACGGGGGCTGCTATATTTGAGTATTCCGTTTGGGCCAATCTAGGAGAAAAGCTTACCTTTGTTCCTCAGGACTCAAGGAGTGATGGGCAGAAGAAACTTTTATTTTATCCTAGAGAACATCAAGTATCAGTCACAGATGATAATTGTCAAGTTTATATTCCTACATTTTCTTGTCAACTGGGTGCATATATTGAAGGATCAGTTTCACCTCCTCTTTCTGGCGTCCATATCAGAATTTTTGCTGCTGGAGACAGCAGCATTAGTACACTTAAAAGTGGTGAATTGGTTCTTGAAACGACCACTGGTACTGATGGTTCCTTTGTGGCAGGTCCTCTGTACAATGATATTGGTTACAATGTTGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCACCTCATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTCAGTACACATACATCACAAAGATGATGCTAAAGAGCCCATTCCTTCTGTTCTGTTGTCTTTGAGTGGTGACAATGGTTATAGAAACAACTCAGTATCAGGAGCTGGAGGGACATTCCTGTTTGACAATTTGTTTCCTGGAATGTTTTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGAGCTTGGAGCAGGGGAGTTCAAAGAAGTAGTTTTCCGGGCCACACGTGTAGCCTACAGTGCTACAGGTATAGTCACTCTCTTGTCTGGTCAACCCAAAGGAGAAGTTTCGGTTGAAGCAAGGTCAGAGTCAAAAGGCTATTTTGAGGAAACTGTGACAGATTCTTCTGGAAATTATCGTCTGAGAGGACTACTGCCTGATACTGACTATGTTGTTAAAGTGGCTAAAAGGGACGTGGGCAGTTCTAATATAGAGCGTGCATCTCCAGATTCTATTGCTGTCAAGGTTGGAACTGAGGATATCAAGGGATTGGATTTTATAGTTTTTGAGGAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAATGGTACAGATGAACTACGTAAACACCTGATGGTAGAAATCAGGTCAGCTAGTGACCTAAACAAGATAGAGTCAGTCTTCCCCCTACCAATTTCAAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGCAGACACCTTCTAAAGCTTCAATCTGGTCTCCCATCAAGCTCACTTAAATTTGAATCTGATCTCATTGAGGTCGACTTGGAGAAAAATGTTCAGATCCATGTTGGCCCACTGAGATACTGGATTGAAGATCAGCTGAAGCAGGAGCTGACTCCGGCACCAGTATTCCCTCTTATAGTTGCATTTCTAGTTGTTGCACTATTTCTTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACGGTAGACATACCCACACCAGGACTCACTGCGGTTTCAAGAAAAGACGTGAAGAAGCCGATGTTGCGAAAGAAGACTTATTAA 3588 0.4103 MSIGDAFLCLLFIATCSISAASADSIYGCGGFVEASSSLVKSRKQTDVKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSVKNGGPSNVKVELLSLSGDLVSSVLTSSSGSYLFTNIIPGKYELRASNPDMKVEVKGSTQVELGFGNGVVDDIFFVPGYSISGFVVAQGNPILGVYIFLHSDDVSEVECLKGSANGPRQGVALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNVKHQHATVPQKFQVTGFSVGGRVVDGNGMGVEGVKIIVDGHVRSIADNQGYYKLDQVTSTHYTIEAQKEHYKFKKLENYMVLPNMASIEDINAISYNLCGLVRMASGGLKAKVALTHGPDNVKPQKKQTDENGNFCFEVPPGEYRLSAIAATPENGAGLMFAPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVSVTLVRQVDKHNEERKTISLTTESSEFLFSDVIPGKYSLEVKHSSPESVTLEDNWCWEQSFIDVNVGAEDLEGILFVQKGYWVNIISTHNVDGYLTQPDGSNVNFKIQKGSQHICVEQPGVHEFHFVDSCIFFGSSSVKINTSDQSPIHLTGEKYLLNGQINVQSGSLDALPDSIVVDIKHDRTGVIDYATAILKSHVKDETGAAIFEYSVWANLGEKLTFVPQDSRSDGQKKLLFYPREHQVSVTDDNCQVYIPTFSCQLGAYIEGSVSPPLSGVHIRIFAAGDSSISTLKSGELVLETTTGTDGSFVAGPLYNDIGYNVEASKPGYHLKQVAPHSFTCQKLSQISVHIHHKDDAKEPIPSVLLSLSGDNGYRNNSVSGAGGTFLFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGEFKEVVFRATRVAYSATGIVTLLSGQPKGEVSVEARSESKGYFEETVTDSSGNYRLRGLLPDTDYVVKVAKRDVGSSNIERASPDSIAVKVGTEDIKGLDFIVFEEPEMTIISCHVEGNGTDELRKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLKLQSGLPSSSLKFESDLIEVDLEKNVQIHVGPLRYWIEDQLKQELTPAPVFPLIVAFLVVALFLSMPRLKDLYQATVDIPTPGLTAVSRKDVKKPMLRKKTY* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1830 1195 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 7 1175 - -
Gso19g1830 1195 PANTHER NODAL MODULATOR 1-RELATED 7 1175 - -
Gso19g1830 1195 Gene3D - 329 401 - -
Gso19g1830 1195 SUPERFAMILY Starch-binding domain-like 219 297 IPR013784 GO:0030246
Gso19g1830 1195 Pfam Carboxypeptidase regulatory-like domain 945 1006 - -
Gso19g1830 1195 SUPERFAMILY Cna protein B-type domain 146 197 - -
Gso19g1830 1195 Gene3D Immunoglobulins 143 216 IPR013783 -
Gso19g1830 1195 SUPERFAMILY Cna protein B-type domain 864 921 - -
Gso19g1830 1195 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1830 Gso-Chr19 47015560 47029710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1830 - - gmx:100815384 2357.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1830 19 47015560 47029710 Gso3g1868 3 44233060 44247142 GST