Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1789 ATGTCTACGCAACCAAAGCTTGGTCGGATTCCCAGTATCAGAGACCGAGTTGAAGACACTCTCTCTGCTCACCGTAACGAACTCATTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAGAGGGATTTTGCAACCCCATAATTTGATTGATGAACTTGACAACATCCCTGGCGATGATCAAGCAATAGTGGATCTTAAAAATGGTCCCTTTGGTGAAATCGTCAAGTCTGCAAAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAGCTCAGCGTGGAGCAATTAAGTGTTTCTGAATATCTCAGCTTCAAGGAAGAACTTGTAGATGGAAAGATTAATGACAATTTTGTATTGGAGCTTGATTTTGAGCCATTTAATGCCACATTTCCTCGTCCAACTCGCTCAGCATCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCTATTATGTTTCGCAACAAGGATTCCTTGCAGCCCTTGCTTGATTTCCTCCGAGCTCACAAATACAAGGGCCATGCTCTGATGTTAAATGATAGAATACAAACCATTTCCAAACTTCAGTCTGCATTGGCCAAGGCTGAGGATTATCTCTCTAAGCTTGCACATGATACACTCTATTCAGAGTTTGAATATGTATTGCAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTGAACGGGTATTGGAAATGATGCATCTGCTATTGGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTACCAATGGTATTCAATGTTGCTATATTATCTCCTCATGGCTACTTTGGACAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAAAATGAGATGCTCCTTCGGATCAAGAAACAGGGACTTGATTTCACTCCAAGAATTCTAATAGTTACCAGGTTAATACCTGATGCAAAGGGGACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGACCATACTCATATTTTGCGAGTTCCATTCAGATCAGAGTCAGGAACTCTCCGTAAATGGATTTCAAGGTTTGATGTGTGGCCTTATCTAGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGGTATCCTGATTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACAATCGCGCATGCACTTGAGAAGACAAAATATCCAGATTCAGATTTATATTGGAAGAAATTTGAGGATAAATACCACTTTTCATGCCAATTTACTGCTGACCTAATAGCCATGAATAATGCTGATTTTATCATCACCAGTACATACCAGGAGATTGCAGGAACGAAAAATACTGTTGGCCAGTATGAGAGCCACGCTGGTTTTACTCTTCCTGGGCTCTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCTGATATGTCAATATATTTCCCCTACTCTGAAAAGCAGAACAGACTTACAGCCCTGCATGGTTCAATTGAACAGCTATTATTTGCTCCTGAGCAGACTGATGAATACATTGGTTTATTGAAAGACAAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTAAAAAACATAACTGGATTGGTAGAAAGCTTTGGTAAGAACAGCAAATTGAGGGAACTGGTCAACCTTGTCATAGTAGCTGGTTATATTGATGTAAAGAAGTCCAGTGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGAGCTCATGAAAAAGTATAACTTAGTTGGTGATTTTCGTTGGATTGCTGCCCAAACAAATAGGGCACGTAATGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGAATTGTGGACTCCCCACTTTTGCTACTTGCCATGGTGGTCCGGCTGAGATCATTGAGCATGGTATATCAGGATTCCACATTGATCCTTATCACCCTGATCAAGCTTCACAGCTATTAGTTGAATTTTTCCAAAAGAGCAAGGAGGACCCAAGCCATTGGAAGAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACGTGGAAGATTTATTCCGAAAGGCTTATGACTTTGGCGGGAGTTTATAGTTTCTGGAAATACGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTATATCCTCAAGTTCCGTGATTTGGCAAATTCTGTTCCGCTAGCTAAGGATGATGCAAGTTAA 2439 0.419 MSTQPKLGRIPSIRDRVEDTLSAHRNELISLLSRYVAQGRGILQPHNLIDELDNIPGDDQAIVDLKNGPFGEIVKSAKEAIVLPPFVAIAVRPRPGVWEYVRVNVSELSVEQLSVSEYLSFKEELVDGKINDNFVLELDFEPFNATFPRPTRSASIGNGVQFLNRHLSSIMFRNKDSLQPLLDFLRAHKYKGHALMLNDRIQTISKLQSALAKAEDYLSKLAHDTLYSEFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVAILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDHTHILRVPFRSESGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDLYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHAGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQNRLTALHGSIEQLLFAPEQTDEYIGLLKDKSKPIIFSMARLDRVKNITGLVESFGKNSKLRELVNLVIVAGYIDVKKSSDREEIAEIEKMHELMKKYNLVGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMNCGLPTFATCHGGPAEIIEHGISGFHIDPYHPDQASQLLVEFFQKSKEDPSHWKKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLAKDDAS* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1789 812 Gene3D Glycogen Phosphorylase B; 530 757 - -
Gso19g1789 812 PANTHER SUCROSE SYNTHASE 1 812 - -
Gso19g1789 812 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Gso19g1789 812 TIGRFAM sucr_synth: sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Gso19g1789 812 Gene3D - 12 148 - -
Gso19g1789 812 Gene3D Glycogen Phosphorylase B; 283 800 - -
Gso19g1789 812 PANTHER - 1 812 IPR012820 GO:0005985|GO:0016157
Gso19g1789 812 Pfam Glycosyl transferases group 1 568 742 IPR001296 GO:0016757
Gso19g1789 812 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Gso19g1789 812 Gene3D - 149 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1789 Gso-Chr19 46641836 46647878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1789 4 810 Glycosyltransferase AT4G02280 82.404 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1789 K00695 - gmx:100802045 1615.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1789 19 46641836 46647878 Gso3g1823 3 43879698 43885973 GST