Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1783 ATGGAACGCTCTACAAAACTCTTCTCGGCGGCGTTGGTTCTCTGCGTGGTTGTGATGGCACACCAGACAGCAGCACAGGAACTAAAAGGAAAGAACCTAATCAACAAGGTTTGCACAATCACCCCGAGCAGAGACCTCTGCGTTGGGATCCTCTCATCGGACCCAATCAGAAGCCCTGACGCAGACCTCAAGGACTTGGCAGTTATCTCCCTTAGGGTTGCTGCCAGAAACGCCTCCGGCATCCTCAGCGAAGCCAAAATGTTGATCGATGACGACAACCTAGACCCCGACGTCCAACAAGGTTTGTCTGATTGCAAGGAGACAATCTTGGACGCCGAGAGCCAGCTCGAGGACACCATTGCATCCTTGTTGGTGGATTCCGACACCGACACACAGATTTGGCTCAAGGCTGCCTTGGCCGCCATCGACACCTGCGACGCTTCCATTCCCGGAGACGACGACGTTCTCTCCGTCAAGAGTGCCATGTTCCGCAGGCTGTGCAACATTGCCATTGCCATCACCAAGCGCTTGAACAAACCTCTTAAATTCTAA 552 0.5344 MERSTKLFSAALVLCVVVMAHQTAAQELKGKNLINKVCTITPSRDLCVGILSSDPIRSPDADLKDLAVISLRVAARNASGILSEAKMLIDDDNLDPDVQQGLSDCKETILDAESQLEDTIASLLVDSDTDTQIWLKAALAAIDTCDASIPGDDDVLSVKSAMFRRLCNIAIAITKRLNKPLKF* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1783 183 Pfam Plant invertase/pectin methylesterase inhibitor 32 173 IPR006501 GO:0004857
Gso19g1783 183 SMART PMEI_2 29 173 IPR006501 GO:0004857
Gso19g1783 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 177 IPR035513 -
Gso19g1783 183 PANTHER PECTINESTERASE 1 180 - -
Gso19g1783 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 177 IPR035513 -
Gso19g1783 183 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 180 - -
Gso19g1783 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1783 Gso-Chr19 46601602 46602360 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1783 - - gmx:102667060 353.984