Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1779 ATGGAGAAAATAGAGCACAAAACGGTGAGGACGAATGGAATAAACATGCACGTGGCATCCATTGGGTCAGGCCCAGTTGTACTGTTCCTCCACGGCTTCCCGGAGCTTTGGTACACGTGGCGCCACCAGCTTCTGTCCCTCTCCGCCGTGGGCTACCGGGCCATCGCCCCCGACCTCCGCGGCTACGGCGACACCGACGCCCCGCCCGACGCTTCCTCGTACTCCGCCCTCCACATCGTCGCCGACCTCGTCGGGCTTCTCGACGCTTTGGGAATCGAGCGAGTTTTTCTGGTGGGCCATGACTGGGGAGCCTCCATAGCCTGGCATTTCTGCTTGCTGAGGCCCGATCGTGTGAAGGCCCTCGTCAACATGAGCGTCGTGTTCCGCCCCAGAAACCCTAATCGAAAGCCCATTCAGAGCCTCAGGGCCATCATGGGCGACGATTACTATATCTGCAGGTTCCAGAAACCTGGGGAGGTTGAAGAAGAGTTTGCACGTGCTGGTGCTGCGAGAATTATAAAGACATTTATTGCATCTCGCGATCCACGACCACCTTGTGTGCCTAAGGAGATAGGATTTGGTGGTTCACCTGACCTTCGTATTGATCTACCTTCGTGGCTGACCGAAGAAGATGTCAATTATTATGCCAGCAAATTTGAACAGAAAGGTTTCACTGGCGGCCTAAACTACTATCGCGCTATGGACCTAACCTGGGAGCTCACAGCAGCATGGACTGGAGTACAGATTAAGGTACCAGTCAAGTTTATTGTGGGAGACCTTGACATTACATACAACACTCCAGGTGTTAAGGAGTATATACATAATGGTGGCTTTAAGAGAGACGTACCATTCTTGCAAGAATTGGTTGTGATGGAAGGAGTAGCTCACTTTATAAATCAGGAAAGGCCCCAAGAGATCAGCGCGCATATATACGACTTCATCAAGAAATTCTAA 954 0.5199 MEKIEHKTVRTNGINMHVASIGSGPVVLFLHGFPELWYTWRHQLLSLSAVGYRAIAPDLRGYGDTDAPPDASSYSALHIVADLVGLLDALGIERVFLVGHDWGASIAWHFCLLRPDRVKALVNMSVVFRPRNPNRKPIQSLRAIMGDDYYICRFQKPGEVEEEFARAGAARIIKTFIASRDPRPPCVPKEIGFGGSPDLRIDLPSWLTEEDVNYYASKFEQKGFTGGLNYYRAMDLTWELTAAWTGVQIKVPVKFIVGDLDITYNTPGVKEYIHNGGFKRDVPFLQELVVMEGVAHFINQERPQEISAHIYDFIKKF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1779 317 SUPERFAMILY alpha/beta-Hydrolases 2 316 IPR029058 -
Gso19g1779 317 Gene3D alpha/beta hydrolase 1 317 IPR029058 -
Gso19g1779 317 Pfam alpha/beta hydrolase fold 25 142 IPR000073 -
Gso19g1779 317 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Gso19g1779 317 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Gso19g1779 317 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Gso19g1779 317 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Gso19g1779 317 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
Gso19g1779 317 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Gso19g1779 317 PANTHER EPOXIDE HYDROLASE 1 317 - -
Gso19g1779 317 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Gso19g1779 317 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Gso19g1779 317 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Gso19g1779 317 PANTHER HYDROLASE, PUTATIVE-RELATED 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1779 Gso-Chr19 46575119 46577562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1779 1 317 Acyl Lipid Metabolism Gene Families AT4G02340 71.293 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1779 - - gmx:100799903 657.136