Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1775 ATGACAGAGAAGAAGCGGAAGGAGAGGGACGAAGGCAACCGCCAAAGACTGAAGCCGAAGAAGAAGCCAAACACTCAATGGAAGAAGAGAGGCCCTCGTTTGCCCTCATCTCTTCAGAAACAGCTCCACCGTTTAAACCCCACCACTTCCTTCGACAGCGTCGATTCCGATGACGACAATGACGTTTACGAGTACGAGGAAGAACGGGCTGAGGAGGAGTCCAAGAAAAACAAGCGTTACGACCCTGCATCCGTCGACGATGACCTTGCTCAAGATATTGAGGATGAGAATGTGCAATCTGATGATGAAAGTGAGGATGATGATTACACCGGGACAAAGAGGAATGAAAATGCTCCAAGTGACGATTCTGGAGAGGAAGACGATGATAGGCATGCAAGGATGCTACAAGCAATTACTGGCATGCCGAGTGAGGCTTTTGAAGAGAATAAGAAGAAAAAGAAGGTGATGAAGGACACTGTTATACCAGAGCTATATCCAGAGTCTGAATATAATCCTAGTCGTGATGTTGTGGATGGTGACGGACGCATTAGCATAGAAGACCTACTGAATCCTCTTCGTGAAAAATCTGGTTATGGAAAACTTAGGAAGAGATATCAACAAATTGAGAAGAATGCTAAAATTATTCATGTGCCACTTTCAAAGGCAGTTCAAGCTAAGGTAGAGAGGAAGGCAGCATATGAAATATCAAAGAAAGATGTCACCAAGTGGCAGCATATTATTCAGAGAAATAGAGAGGCCCCAACTATTTTCTTTGATGAAAATGTAAATTTAGGGTTTTCAACTGTAGGAGCAATAGCTTCTGAATTTGAACCCAGAACTGAATTTGAGAAGAAAATTGCTGCACTAGTTTATGATGAGGAAGTTATGGAAGCTCATAAAAAGGATGGTTCTAAGCTTCTTGAAATGAACAAGGTCTCTATTGAAGATGAGAAGGATAGGCAAAATCGGATTGCTAAAATGCGGAGCCTTCTTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATTAAGTCTAGAACATTTCATCGTTTGTTGAAGAAAGATAGATTAAAGGCAGAAGCTTCTCAGATGCAAATGGACCCTGAAGCTGCTAAAGAATATGCCATGAAACAAGAGCGTCAAAGGGCTGAGGAACGCATGACGCTGAAACACAAAAACCATAATCCGTGGGCTGCACGTATTATCCAGCGTGGTTTACATAACCAAGATGAAGGAACTCGTGCTGCCATACATGAACAACTTCAAAGGCATGCTGAATTGACTAGAAAAATGAAGTCTATGAAGGGTAGCAGCAGTAGCAGTGAAGATAGCAGTGATGAGGATGAGGATGACAACTCTGCTGGTTCTGATCAGGATAGGGATTACAAGATTTTGGGAAAAGCTAAAGAAAAAACAGTGAAAGTGTTGGAGGAAGAGGATGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAGGCAGCTGTTGAAGAAGCCAACCTTGCTTTCCACGAATATGAAGATTCCTTGAAGAAGTTGGAGAATACTGGTGGCTCAGAAGATCTGAAAGCTGCTTCTACCAGTGGCAGAAGAGTATTTGGAATGGCTAAAGCCCAGATGTCTGATACCAGTAATAAGGTAAAATCAGATAATTGCTATGATGGCAGTGATAGTGAGGATGACTTGGGGATCAGCAAAAGTGGCAATATAGAGAATGAGGGAAGCGACCTTTTGCATACGGATGTAAACAAGGATTTGGTTGTAATTCAAGATGACACTGATACTCACCGGGAATCAGTTTTTAAGAATATTGATGAGATTATTAAAAATCCTGGGCCAAAAACTACATATGATGTTTCCATATTTGTTTCAGATACATGGAAAAAGGCAAAAAACAAAAATGAAGACATGACTATCAAGAAGTCTCCGAAGCTTACAGAACTAGATATGCAAGCTATAAAAGTTACTGAAAAGGAATTTGGAGAGGATAGTGATACAGATTGTGAAGGACAGATGGTGGATGGAATTCTGTCTTCTGTTTCTAAAGTACCTTATGAACTTCCTTCTCAAGAGGAGCTCATTCGGCAAGCTTTTGCTGGGGATGATGTAGATGATGATTTTGAAAAAGATAAGCAGGAGATCCTCAACGAAGAAAATCCTGAGCCAGAGAAGCCTCTATTACTTCCTGGCTGGGGCCAGTGGACACATGTACAGCAAAAGAAAGGTTTACCATCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAAGCCCTCAAAAAAAGGAAGGATGCTCAGCTAAAAAATGTGATTATATCTGAGAAGATAGACAAGAAGGCTGAGAAACTACATACTAAATCATTGCCATACCCTTTTACTTCCCAAGAGGTCTTTGAACAGAGCATGCGTGTGCCCATCGGACCTGAATTTAATCCAGCAACTGCAATTGGTCCTCTTAACCGGCCGGAAGTGGTGAAGAGACCAGGTGTTATTATAAAACCAATAGAGTTCGAAGAAGTGAATCCTCATGAAAAAACAGAGCAACGGAGTGGAGGAGATAAGCGTAAGTTTAAGAAAAATAAAGTCAATGCTGACAATCCCATGAAAAAGGGGAAGGTGGGACGAAAAAGTTAA 2673 0.4123 MTEKKRKERDEGNRQRLKPKKKPNTQWKKRGPRLPSSLQKQLHRLNPTTSFDSVDSDDDNDVYEYEEERAEEESKKNKRYDPASVDDDLAQDIEDENVQSDDESEDDDYTGTKRNENAPSDDSGEEDDDRHARMLQAITGMPSEAFEENKKKKKVMKDTVIPELYPESEYNPSRDVVDGDGRISIEDLLNPLREKSGYGKLRKRYQQIEKNAKIIHVPLSKAVQAKVERKAAYEISKKDVTKWQHIIQRNREAPTIFFDENVNLGFSTVGAIASEFEPRTEFEKKIAALVYDEEVMEAHKKDGSKLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSRTFHRLLKKDRLKAEASQMQMDPEAAKEYAMKQERQRAEERMTLKHKNHNPWAARIIQRGLHNQDEGTRAAIHEQLQRHAELTRKMKSMKGSSSSSEDSSDEDEDDNSAGSDQDRDYKILGKAKEKTVKVLEEEDEVPKSGLLSLPFMRRGLEKRKEAAVEEANLAFHEYEDSLKKLENTGGSEDLKAASTSGRRVFGMAKAQMSDTSNKVKSDNCYDGSDSEDDLGISKSGNIENEGSDLLHTDVNKDLVVIQDDTDTHRESVFKNIDEIIKNPGPKTTYDVSIFVSDTWKKAKNKNEDMTIKKSPKLTELDMQAIKVTEKEFGEDSDTDCEGQMVDGILSSVSKVPYELPSQEELIRQAFAGDDVDDDFEKDKQEILNEENPEPEKPLLLPGWGQWTHVQQKKGLPSWMLKKHEDAQKKRAEALKKRKDAQLKNVIISEKIDKKAEKLHTKSLPYPFTSQEVFEQSMRVPIGPEFNPATAIGPLNRPEVVKRPGVIIKPIEFEEVNPHEKTEQRSGGDKRKFKKNKVNADNPMKKGKVGRKS* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1775 890 MobiDBLite consensus disorder prediction 852 890 - -
Gso19g1775 890 Coils Coil 761 781 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 107 130 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 547 586 - -
Gso19g1775 890 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 7 866 IPR006709 GO:0006364|GO:0032040
Gso19g1775 890 MobiDBLite consensus disorder prediction 69 86 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 1 18 - -
Gso19g1775 890 Pfam Utp14 protein 133 850 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 39 53 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 562 576 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 852 884 - -
Gso19g1775 890 Coils Coil 506 526 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 87 106 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 429 466 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 1 130 - -
Gso19g1775 890 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1775 Gso-Chr19 46551098 46557821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1775 K14567 - gmx:100811431 1650.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1775 19 46551098 46557821 Gso3g1811 3 43801204 43807116 GST