Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1765 ATGCTTCCTCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCTATGTTGGTGGAACTGAAAAATGGGGAGACATATAACGGGCATTTGGTTAATTGCGATACATGGATGAACATCCATCTCCGAGAAGTCATTTGTACATCTAAAGACGGAGATAGATTTTGGAGGATGCCTGAATGCTATATACGAGGCAATACAATCAAGTACCTTCGAGTTCCTGATGAGGTTATTGACAAAGTTCAAGAAGAAACCAAGAGCCGTGCAGATCGCAAACCACCTGGAGTGGGACGTGGAAGGGGAAGAGGCAGAGAGGATGGTCCTGGTGGGCGCCCAGCAAAAGGAATTGGGCGTGGTCTTGATGATGGTGGTGCCAAGGGAGCTGGAGGAGGCCGAGGCAGGGGTGGTCCCAGTGGAAAGCCTGGTGGAAACAGAGGGCGAGGTAGAGGCTGA 447 0.5101 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREDGPGGRPAKGIGRGLDDGGAKGAGGGRGRGGPSGKPGGNRGRGRG* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1765 148 SUPERFAMILY Sm-like ribonucleoproteins 3 127 IPR010920 -
Gso19g1765 148 PANTHER SM-LIKE PROTEIN LSM4 1 137 - -
Gso19g1765 148 MobiDBLite consensus disorder prediction 79 109 - -
Gso19g1765 148 Gene3D - 1 83 - -
Gso19g1765 148 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Gso19g1765 148 MobiDBLite consensus disorder prediction 79 148 - -
Gso19g1765 148 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 137 IPR027141 GO:0006396
Gso19g1765 148 SMART Sm3 5 71 IPR001163 -
Gso19g1765 148 Pfam LSM domain 6 70 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1765 Gso-Chr19 46456933 46459457 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1765 K12623 - csv:101203991 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1765 19 46456933 46459457 Gso3g1799 3 43715602 43718304 GST