Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1764 ATGGAATTGATGTGTCATTGTTCGAGCTTTCTTCTTCCGCCGGAGAATCCTAACACGACGTGTTCGCTTTCTCTAAAGTACGCTCTCGTTGTTCTCAACCAAAGCCTCCCGAGATTTGCTCCCCTGCTTTGGGACCACGCTCAAGTGCGAGTTTGTGCTGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCTCATCAACAACCTTCCCATGTTCGCACCAGGTACAAGCCTGATGTAATTAAAGGGGACATGGATTCAATCAGGACAGAAGTACTTGACTTCTATGCAAAGCTGGGAACTAAGATAATTGATGAGTCTCATGATCAGGACACCACAGATTTACACAAATGTGTGGCATACATACGTGACCTCACCCCAAATATTGATGGAGCAGAACTATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGACCATGAGATTGGAAATATTAACGTGCTGTGCCGATTTTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCAAAGAATCATTGTCATAAAATCTTTGTTCAATCTTCTGTTGAGGGTCCGCATTGTGGTGTCATTCCCATTGGGATGCCGTCTGGAAGCTCTACAACCACAGGACTCAAATGGGACCTCAATGATGCAGCGATGAGTTTTGGAGGTTTAATAAGCACATCAAATATTGTAAAAGGGGAAATAGTTACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATTAAGAAGCTCTAG 780 0.4333 MELMCHCSSFLLPPENPNTTCSLSLKYALVVLNQSLPRFAPLLWDHAQVRVCADGGANRVYDEMPLFFPHQQPSHVRTRYKPDVIKGDMDSIRTEVLDFYAKLGTKIIDESHDQDTTDLHKCVAYIRDLTPNIDGAELCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNHCHKIFVQSSVEGPHCGVIPIGMPSGSSTTTGLKWDLNDAAMSFGGLISTSNIVKGEIVTVQSDSDLLWTISIKKL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1764 259 PIRSF TPK1 2 259 IPR016966 GO:0004788|GO:0005524|GO:0009229
Gso19g1764 259 PANTHER THIAMIN PYROPHOSPHOKINASE 3 257 - -
Gso19g1764 259 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Gso19g1764 259 Gene3D - 168 258 - -
Gso19g1764 259 Pfam Thiamin pyrophosphokinase, catalytic domain 42 168 IPR007371 GO:0004788|GO:0005524|GO:0009229
Gso19g1764 259 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Gso19g1764 259 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 257 - -
Gso19g1764 259 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Gso19g1764 259 Gene3D Thiamin pyrophosphokinase, catalytic domain 27 167 IPR036759 GO:0004788|GO:0005524|GO:0009229
Gso19g1764 259 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 178 258 IPR036371 GO:0009229
Gso19g1764 259 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
Gso19g1764 259 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1764 Gso-Chr19 46452478 46455901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1764 K00949 - gmx:100795320 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1764 19 46452478 46455901 Gso3g1798 3 43711460 43714874 GST