Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1763 ATGTTAGAAAAGTGTTTGGGAGCTCAAAGGGCGCGAAGATTCCACCGAGCTCTCAGGCATTGCAAGGTCACGATCCTCTGCCTCGTCCTCACCATCGTTGTCCTGCGCGGCACCATCGGCGCCGGAAAATTCGGCACGCCGGAGCAGGACTTGGTTGACATTCGCAACCGCTTCTACACCCGCAAGCTCCCCGAACCCCATCGCCTCCTCGCCGAGCTCCATTCCACAACGACGCCGTTTGAAAGTTCCACTTCCACCACCAATTACAACGCCTTCGACATCAACACCATCTTGGTCGACGAAACAGAAGACGAGAACCGCGAGAAAGTTAACCCACACGAGGCGTATCGTCTCGGCCCCAAAATATCGATCTGGGACGAACAGAGATCTCGCTGGCTTCGCGAGAATCCCAATTTCTCGAATTTCCTTCGACCCAACAAGCCCCGCGTGCTTCTCGTAACTGGGTCGTCGCCGAAACCGTGCGAAAATCCCGTTGGGGATCATTACTTGTTAAAGGCTATTAAGAACAAAATTGATTATTGTCGTTTGCATGGGATTGAGGTGTTCTACAACATGGCTCTCCTCGACGCTGAAATGGCAGGGTTTTGGGCGAAGCTTCCTCTGATAAGGAAGCTTCTTTTGTCGCACCCTGAGGTGGAGTTTCTATGGTGGATGGATAGTGATGCCATGTTCACTGACATGAAGTTTGCGGTGCCGTGGGAGAGGTACAAAGACTCCAACTTGGTGATGCATGGGTGGAATGAGATGGTTTACGATGACAAGAATTGGATTGGGTTGAACACTGGGAGTTTTTTGTTGAGGAATTGTCAGTGGTCGTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCCAAAGGGAAGGTTAGAGATGAAGCTGGGAAAGTACTCACGCGTGAGCTTAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCGATGGTTTATTTGCTGGCTAAGGAGAGGGAGAAGTGGGGTGGGAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGCTATTGGGGGATTTTGGTTGATAGGTATGAGGAGATGATTGAGAATTATCACCCTGGTTTTGGTGACCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCCGTTGAGAGATGCTTGAAGCAGATGGATAGGGCTTTCAATTTTGGGGATAATCAAATACTGCATATTTATGGGTTCACGCACAAGTCGTTGGGTAGTAGGGGAGTTAAGAGAATACGGAATGAGACTAGCAATCCTCTGGAGGTCAAAGATGAACTTGGATTGCTTCATCCAGCGTTTAAAGCAGTTGAGGTATCATAA 1368 0.4905 MLEKCLGAQRARRFHRALRHCKVTILCLVLTIVVLRGTIGAGKFGTPEQDLVDIRNRFYTRKLPEPHRLLAELHSTTTPFESSTSTTNYNAFDINTILVDETEDENREKVNPHEAYRLGPKISIWDEQRSRWLRENPNFSNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKAIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMKFAVPWERYKDSNLVMHGWNEMVYDDKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKEREKWGGKVYLENGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILHIYGFTHKSLGSRGVKRIRNETSNPLEVKDELGLLHPAFKAVEVS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1763 455 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 146 299 IPR029044 -
Gso19g1763 455 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 455 IPR008630 GO:0016021|GO:0016757
Gso19g1763 455 Pfam galactosyl transferase GMA12/MNN10 family 147 386 IPR008630 GO:0016021|GO:0016757
Gso19g1763 455 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1763 Gso-Chr19 46447116 46449040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1763 1 455 Glycosyltransferase AT3G62720 78.775 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1763 K08238 - gmx:100794266 949.118