Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1758 ATGGCAGCAAAGCCAGCTGAAGAAGCTCCTCAAGGAGAAACCCTCAAGTACCAGTCGTGGGTTTTGAAAGTATTGATCCACTGCGATGGCTGCAAAAGGAGAGTCAAGAAAATTCTTCAGGGAATTGATGGGGTTTATACAACAGAGGTTGATTCTCTGCAGCACAAGGTTACTGTCACTGGTAACGTGGACGCTGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAGGGTAGTGGAGCTTTGGCCAGAAAAACCACCTGAGAAGAAAGATAATCAGAAGTCTGGGAAATCCAATAAGGGGGGTGGTGATGGTAATAAAGAGAAGGAAGACCAAAAGAATAGTGAACCAGATGCTGATGGTGGTGGTTCAAATGAGGGTTCTAAAGACGCTCCCGGTGAAGATTCTGACAAAGAAGGTCATAGTGATGAATGTGAGGAGGGAATTGGTGGTGGTGGTGGTGAAGGTGGCAAAAAGAAGAAAAAGAAAAAGAAGAAGAAGAACAAAGGGGAAAACGGTGGTTCTGCATCTGCTCCTCCTAATAAGGGAGGAGGAGGAGAAGAAATTAGTAAAGTTGATGCATTAGTCCCTTCTTCAAATTTCTTGGCTCCTAAGGATCTTATTAGTCCTCCAATTCAGCATGCTTACCCATATCCACCACATGTGTATTATTCACCTCCTCCAGCATATGGATTAAGCTATAACACAGCATATCCTGTCTCTAGTAGTGCTTCATATTATGTTGGTGCTCCTATCATGCCCATGCATGCTTACACTACTTCATACTCTAGACTGCCACCACCTCCTCCACCATCTGATCCAATCAAGCACTATGGTGAGGATGAGGATGAGTATGAAGGTGGTGGATATTGCTCCATTATGTGA 885 0.4441 MAAKPAEEAPQGETLKYQSWVLKVLIHCDGCKRRVKKILQGIDGVYTTEVDSLQHKVTVTGNVDAETLIKRLSRSGRVVELWPEKPPEKKDNQKSGKSNKGGGDGNKEKEDQKNSEPDADGGGSNEGSKDAPGEDSDKEGHSDECEEGIGGGGGEGGKKKKKKKKKKNKGENGGSASAPPNKGGGGEEISKVDALVPSSNFLAPKDLISPPIQHAYPYPPHVYYSPPPAYGLSYNTAYPVSSSASYYVGAPIMPMHAYTTSYSRLPPPPPPSDPIKHYGEDEDEYEGGGYCSIM* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1758 294 ProSiteProfiles Heavy-metal-associated domain profile. 26 81 IPR006121 GO:0046872
Gso19g1758 294 MobiDBLite consensus disorder prediction 263 294 - -
Gso19g1758 294 MobiDBLite consensus disorder prediction 130 156 - -
Gso19g1758 294 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 294 - -
Gso19g1758 294 Gene3D - 16 79 - -
Gso19g1758 294 MobiDBLite consensus disorder prediction 79 191 - -
Gso19g1758 294 Pfam Heavy-metal-associated domain 26 76 IPR006121 GO:0046872
Gso19g1758 294 CDD HMA 26 76 IPR006121 GO:0046872
Gso19g1758 294 SUPERFAMILY HMA, heavy metal-associated domain 20 82 IPR036163 GO:0046872
Gso19g1758 294 MobiDBLite consensus disorder prediction 79 117 - -
Gso19g1758 294 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1758 Gso-Chr19 46413707 46415453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1758 - - gmx:100791626 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1758 19 46413707 46415453 Gso3g1791 3 43671197 43672966 GST