Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1749 ATGATTTCTGCAGGAGGTAGGGATGCAATAAAGGGGCTAGGGTTAGGGTTAGGGTTAGGATTGGGAGCTGGGAGGAAAGAGATGGTGGAGTCTGAGCTTGAGGAAGGTGAGGCGTGCTCGTTTCAGAACCATGAAGATTATGATGCCACCGTTGATCCCGATGTTTCCCTCTCTTACATTGATGAAAAACTTCAAGATGTTCTGGGACACTTTCAGAAGGATTTTGAGGGTGGGGTGTCTGCAGAGAATCTGGGGGCAAAATTTGGTGGCTATGGATCATTTTTGCCCACCTATCAGCGCTCTCCTGTTTGGTCTCATCCAAGGACTCCACACAAAAATTATAGTCAAAATACGCCCAGATCTCCCAATAATTTGCAACCGGAGGGTGGGCAGGGGGATGGTGTACAATGTTCAACTGGAACTCAGTCATCAAGACTTGGCCCAGGTTCTGGTAACTCCTCGAGGATGGCTGCAAACAAGGGTCTCTCTTTAGATGATGGAACTAATCAAGAAAAATACATGACAGCCACTAAGGCTGACACATCCACTTCTAAGCAGGAGTCTCTAAACAAAAAAATTTCTAGCACATCAGACCAGAAGACACTGAAGGTTCGAATCAAAATGGGTCCTGATAGTTTATCAACAAGGAAAAATGCTGCAATATACAGTGAAATTGGGCTTGATGTGTCACCATCATCATCACTAGATGACAGCCCCTCTGAAAGTGAAGGAATTTCTCGTGGTCCTCAAGATGCTCCTTTTGAATCTCCAACCATTATCCTTCAGATTATGACAGACCTCCCTCAGCTATTGTCACCTATTCCCGATGATACCATTGAGTTAACTGTAAAGGAAACACATGCTAGAGATAGCATCCCTGGTCCTGTTCATATGGATGACTTAGAAAGTTTTGACATGTACGAATCTAATAATGTAAAGGGAGACAGAAAGTTGTTAGGTGGGAGTGGGAGGAAAATGAAATCTCTGGAGGGTTGTGAATCCTCAATGGAAGTCAAGGGCTCTACAAAGAAGAATGCTCGGAATGATGTTGGAGTGCTGTCAAGAAAGGAACAAAGTACAGATGCATTGACTATGGAGGAGCTAGTTTCAAAAACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCAGTGATGACTTGGTTAAGGCTGTGGATGGGCAATGTGATTCATTGAAGGAAGCCAACAAAGTTATAGTGAGGGAGAAAACCTTCTCTGATCAGGGACAAAAGGAACGGATGGAGTCAACGTCTACTGAGGTGAATGGTTTTGCTGAGAAGGCAAAGGGAAGTTCAGGAAGAAAAGTTGTGGGAGATAAGGTTTCTCTTGATGACTACCCAGTAAAGGAAAATCACCAGGGAGATAAAAATTTCAACTCAATGATAGTTGAAAATAATGTTTCCAAAGTTAGGACAGAACCAAACACTGAAGAGCCACCTAAGAAGGCTAATCAGAGAGGTAACCTCTCTGAACAAGATGGTGTAGAACATCCATTTCCAGGGGGTAAGAAAAAGCCAAAGGGAAGTCATGGCACCATGGTTATGGAGAGGGAAAAAGAAAACTTGAAGGTTGGATCCTCTTTGGTTCCTAAAATAAAAAAGAGTTCTGATGATAGTTCTGCATCAAGAAATGAAACTGAAGATGCCAGAATACAAAAAAGTCTTGGAAAGACTAGAGATACTTACAAAGATTTCTTTGGGGAATTGGAAGATGAGGAGGATAGACTGGATTCATTGGAGACCCCTTATGGAGAAAAACTGAAGGAATCTGAGGTGGTCGAGAGGAGTGCACCTACGACTAGTTATGGAGCAAAGGAGAGATCTGGTGGTAAGAAAGTTGATAAGCCATTCACAGCTGAAATATACCCTAAAACAGCCACAAATATCTCATGCACTGGAAATGCCAATGGCACTGACCTAGAGAATGGTAAAGGGATTCCTGTAATGATACCTCCTGTTGAGATGGACGATAAGTGGGTACAGTGTGATCGGTGTCAGAAATGGCGTCTTCTTCCCGTTGGAACAAATCTTGACAGCCTACCTGAAAAGTGGCTATGTAGTATGCTTGATTGGCTGCCTGACATGAATCGATGTAGCTTTAGTGAGGATGAAACCACTAAAGCACGTATTGCATTATATCAAGGGCCTCCTCTTGATAGTCAAAGTAACCTGCAGAATGTCTCCGGCAGTGTTATGCTGGGAGGAACCATGGCAATGTCCCAGCATCCTTACCAACACCAACTAAATAATGATATGCATGCAGCACCTGGGGGCAAGAAAAAGCTTATGAAAGAGAGATCAAATTCTATAAATAAAGACAGCTTTTCTCAATCATCATATTCTATTAAGAAAAACTGGCAGTCAGCAGTGAAAAGTAGGAGCTTAAATGATGTGAACAAATCTCCTGTTGTGAGTGAGGCTGATGTTCCAGCAGACAAACACAAAAATAAGCATTGGATGCTGGAGCACAATTCTGATAGAGGTGATACGAAGAATATGAAAGTCAAAAGCAGGAAGGACCCTGATCAAGATAGTTCTAGGCCATCCAAGAAATCTAAGAGTGACAAGGTTCATTCTACCAATGAAGAGTGGATTGTAGAACAGAGTGGGACTACTAGGAAGGTGGGTGATCATAGCTCAAATAGCACTTTTCCAAATACCTCAGTTGGCAAAGATCGACATAGACAGAAAGACCCCTCCTCTTTGCGGGACTCCAAATCAGGAAAAGACAGGCTGCCAGTTTCTGCTGAAACGACAAAAGATAAAGGTCAGGGTTCCTTGGATGAGGGATCCCTGGATCTGGGGAATTGTGATTCAATTGGTAGTGTGAAAAAGAGGAAACTGAAGGGGTATCAGGATGCTCAAACTTACAGCCCTGGTAACCCTCGCCTACAGGAGAGCAAAACTTCTGAGCACGAGTTTAGTAATTCCAGGAAGGAAAAGAAGGCAAAAAATTCAAAATATGAAGGTAAAGAATCAAGTGCCAGTAAAGGCAGTGGTAGATCTGACAAAAAAGTTAGTCATACAAAGACCCAGAAATTCAGGCAAAAGCCTGAGAGCAGTTTGTCACACCGGAGCTTGGATGGAATGGACTGTTCAAAAAGGGACTTGGGGTCTGTACATGCTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTTTCTGGCTCTCATAAAACCAAAGCCAGCTTCCAGGAAGTGAAAGGCTCACCTGTGGAATCAGTTTCTTCATCACCTATAAGAATTTCAAATGCAGATAAGTTTACAAACAAGGAAATTATTGGGAAAGATGATCCTCATGATATTGCTGCTGTGGATAGTCCAAGAAGATGCTCAGATCATGAGGATGATGGTGGGAGTGATCGATCTGGAACAGCTAAGAAGGATAAATCTTTCACCATTGCCCATAGGTCAGATTTTCAGGACAAGGGTGTTAATCACATGTCAGATACTAAACTTAAAGCTCAAACAACCAGCTATTGTACCAATGGGGGTGTGGACACTATAGTCCTAGATGGGACACATCCAGGCACAGAGCAGATTAATCATCCTGGTGAAGACAAGATTGATGTTTATTATGCTACTACATCTCAAGCAAGGAAAAATGGCATAGAATCAGGTTTGGAGGACAACAATGTCAATGACAGCTGTAAGTCAGAGTCCCATGCAGATAAGGTCAAGAGTACTAGTTCTCCATGTCAACTGAAAGATCAGTCTCCTCTACATGAGGCAAAACATAAGGATGGAAAAATTAAGTTGCAGGAGAAGTTTGGGTTCAAGCCTGACCAAAATGAGATTATACATGCTGGCAAGAAAGATTATACAGGAAAAAATGAGAGCAGGAATAAGGAGAATCACTCGAATCGGGGTCACGACTTTCAGGATGTTAGTACAGATGCCCCATGCAAACAGGAGGTATTTCATGCTCCTATTCAGAATCAGTTTCCGGACTGTGATACTGAAAGATCCACAAAGAGGTCTCTTTTGGAAAGAACTGATCAAGAAGTACATGGAAAAGGGAAGCCATTGTCATCATTGCCATATGAAGGATCTCAAGTTGAGATATTAGGTCGTTGCCCACGACCAGTTGGCTTACTTAAAGGAAATGGAGATATGGAAGTTGATCCTTCCAAAGTTGATGATGTGTCAAAGTTACAAAAGAAGCAATTGAAAAAGACTGACCATCAAAATGGAAATCTGCAAATTGGTTCAAGAAATCCCATACTTAATGGTCACAAGTCCAAGGAGCTTGATGCCCCTAGTCCAGCTAGAAGGGATTCTTCCTCCCATGCTGCTAACAATGCTCTGAAAGAAGCTAAAGATCTAAAACATCTGGCTGATCGTCTTAAGAATACTGGATCCAGCGTTGAGGGCACTAGTCTTTACTTCGAGGCAGCCCTCAAATTTCTTCATGGAGCCTCTCTGTTAGAATCTGGCAACAATGATAATGCTAAACACAATGAGATGATTCAATCAATGCAAATTTATAGTAGTACAGCAAAATTGTGCGAGTTTTGTGCTCATGAATACGAGAAATCAAAAGACATGGCTTCAGCTGCTCTTGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCAGACAGCACTGCAAATGGCTCCTCTTGGCGAGTCTCCATCATCATCTGCCTCTGATGTAGACAATGCTAACAACTCTACAGCGGCCGACAAGGTCACCATATCTAAGAGTGTCAATTCGCCCCAAGTAGCTGGAAACCATGTTATTTCTGCACGAAATCGTCCCAATTTTGTGCGATTGCTCAATTTTGCTCAGGATGTTAATTTTGCCATGGAAGCCGCAAGGAAATCACGGAATGCTTTTGCAGCTGCTAATTCAAGCCTGGCTGTGGACAAGAATGCAGATGGTATCTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGAGTTACTACGTTTGGTAAAAGTTGCTGTGGAGGCCATTAATCGTTAA 5046 0.4253 MISAGGRDAIKGLGLGLGLGLGAGRKEMVESELEEGEACSFQNHEDYDATVDPDVSLSYIDEKLQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPVWSHPRTPHKNYSQNTPRSPNNLQPEGGQGDGVQCSTGTQSSRLGPGSGNSSRMAANKGLSLDDGTNQEKYMTATKADTSTSKQESLNKKISSTSDQKTLKVRIKMGPDSLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRGPQDAPFESPTIILQIMTDLPQLLSPIPDDTIELTVKETHARDSIPGPVHMDDLESFDMYESNNVKGDRKLLGGSGRKMKSLEGCESSMEVKGSTKKNARNDVGVLSRKEQSTDALTMEELVSKTMKLPLLSSSYSFSDDLVKAVDGQCDSLKEANKVIVREKTFSDQGQKERMESTSTEVNGFAEKAKGSSGRKVVGDKVSLDDYPVKENHQGDKNFNSMIVENNVSKVRTEPNTEEPPKKANQRGNLSEQDGVEHPFPGGKKKPKGSHGTMVMEREKENLKVGSSLVPKIKKSSDDSSASRNETEDARIQKSLGKTRDTYKDFFGELEDEEDRLDSLETPYGEKLKESEVVERSAPTTSYGAKERSGGKKVDKPFTAEIYPKTATNISCTGNANGTDLENGKGIPVMIPPVEMDDKWVQCDRCQKWRLLPVGTNLDSLPEKWLCSMLDWLPDMNRCSFSEDETTKARIALYQGPPLDSQSNLQNVSGSVMLGGTMAMSQHPYQHQLNNDMHAAPGGKKKLMKERSNSINKDSFSQSSYSIKKNWQSAVKSRSLNDVNKSPVVSEADVPADKHKNKHWMLEHNSDRGDTKNMKVKSRKDPDQDSSRPSKKSKSDKVHSTNEEWIVEQSGTTRKVGDHSSNSTFPNTSVGKDRHRQKDPSSLRDSKSGKDRLPVSAETTKDKGQGSLDEGSLDLGNCDSIGSVKKRKLKGYQDAQTYSPGNPRLQESKTSEHEFSNSRKEKKAKNSKYEGKESSASKGSGRSDKKVSHTKTQKFRQKPESSLSHRSLDGMDCSKRDLGSVHASVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRISNADKFTNKEIIGKDDPHDIAAVDSPRRCSDHEDDGGSDRSGTAKKDKSFTIAHRSDFQDKGVNHMSDTKLKAQTTSYCTNGGVDTIVLDGTHPGTEQINHPGEDKIDVYYATTSQARKNGIESGLEDNNVNDSCKSESHADKVKSTSSPCQLKDQSPLHEAKHKDGKIKLQEKFGFKPDQNEIIHAGKKDYTGKNESRNKENHSNRGHDFQDVSTDAPCKQEVFHAPIQNQFPDCDTERSTKRSLLERTDQEVHGKGKPLSSLPYEGSQVEILGRCPRPVGLLKGNGDMEVDPSKVDDVSKLQKKQLKKTDHQNGNLQIGSRNPILNGHKSKELDAPSPARRDSSSHAANNALKEAKDLKHLADRLKNTGSSVEGTSLYFEAALKFLHGASLLESGNNDNAKHNEMIQSMQIYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHTSASRDRHELQTALQMAPLGESPSSSASDVDNANNSTAADKVTISKSVNSPQVAGNHVISARNRPNFVRLLNFAQDVNFAMEAARKSRNAFAAANSSLAVDKNADGISSIKKALDFSFQDVEELLRLVKVAVEAINR* 1682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1749 1681 MobiDBLite consensus disorder prediction 504 531 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 543 562 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 228 253 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 102 169 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 814 869 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 1209 1257 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 330 350 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 1373 1436 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 415 445 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 755 1139 - -
Gso19g1749 1681 Coils Coil 1438 1458 - -
Gso19g1749 1681 PANTHER CW-TYPE ZINC FINGER 28 1679 - -
Gso19g1749 1681 Pfam CW-type Zinc Finger 666 711 IPR011124 GO:0008270
Gso19g1749 1681 Gene3D - 657 715 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 596 618 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 476 562 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 177 196 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 1379 1400 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 228 245 - -
Gso19g1749 1681 PANTHER CW-TYPE ZINC FINGER 28 1679 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 897 934 - -
Gso19g1749 1681 ProSiteProfiles Zinc finger CW-type profile. 660 713 IPR011124 GO:0008270
Gso19g1749 1681 MobiDBLite consensus disorder prediction 973 1042 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 776 808 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 1049 1091 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 870 896 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 1096 1139 - -
Gso19g1749 1681 MobiDBLite consensus disorder prediction 1271 1302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1749 Gso-Chr19 46348456 46359952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1749 - - gmx:100806105 3209.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1749 19 46348456 46359952 Gso3g1782 3 43585501 43596917 GST