Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1740 ATGGTAACCCCAACAAGTCCAAGTGAGTTGAAATGGACCCAGCCCACGACCTTCGCTTCTGGTTGTGTTTTGTGTTTTGTCATTTGCGAGACACAGACATCGTCGTCGTCTCCGCCGTATGCGCTAGCTTGGGTTGCTCCAATGGAGGATACCCAAGAAATTGAGGAGCAAGCACACAAAGAAGTGATTTCAGACAAAACATCTGAGAAGCAGCAGGAAACTCTTGATGAAATTCTTTCACGACACAGGAAAGAGATATTGCAACTGCAGAAAAAAGAAGTTGAGATGAAAAAAGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAAGAAGAGGTTTGTCAACTTTCTGCTAAGCTTAAGGAGAATCATGCCAAAGAACTGACTGCATTAGGCTATATCAGTGGTAATGGAAATGAAAAGAGCAATTTGGACAGTCTGGTGAAGGCCATAGCTGGAGTATCTGTTACTAGTCAACCTGAACATACAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAGTGACATTATAAGTGATCGTGTGATTGAGAACGAGAAATTGGAAAAGAAGTTGAAGCCTCTTGGCTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCCATTGAGGATCAGCTGGCCATCCTCTCTGGGGGTAGATCTCCTTATACATACCAAGAACTTCGAGAAATGGTGGCTGCTTACATGAGAAATCATACATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATTTAATTGAAGATGATTCCAATGAATCATTTGCTCAGAAGTTTGAAAATTATTGTAAAGAAGTGGAGTCCACAGCTACATGGGGGGGACAACTAGAACTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGGTCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAATCTGATGGTGGCACTGGCTTGTCTAATTCGAGTATCATGCTTTCTTATCACAAGCATGCTTTTGGGCTAGGAGAGCATTATAATTCTGTGGTTCCAACATGA 1116 0.4319 MVTPTSPSELKWTQPTTFASGCVLCFVICETQTSSSSPPYALAWVAPMEDTQEIEEQAHKEVISDKTSEKQQETLDEILSRHRKEILQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVCQLSAKLKENHAKELTALGYISGNGNEKSNLDSLVKAIAGVSVTSQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQSDIISDRVIENEKLEKKLKPLGLTVCEIKPDGHCLYRAIEDQLAILSGGRSPYTYQELREMVAAYMRNHTSDFLPFFLSENLIEDDSNESFAQKFENYCKEVESTATWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNSSIMLSYHKHAFGLGEHYNSVVPT* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1740 371 MobiDBLite consensus disorder prediction 164 192 - -
Gso19g1740 371 MobiDBLite consensus disorder prediction 170 192 - -
Gso19g1740 371 PANTHER DEUBIQUITINASE OTUD6B 71 370 - -
Gso19g1740 371 Pfam OTU-like cysteine protease 225 365 IPR003323 -
Gso19g1740 371 Coils Coil 79 118 - -
Gso19g1740 371 ProSiteProfiles OTU domain profile. 219 371 IPR003323 -
Gso19g1740 371 PANTHER OTU DOMAIN CONTAINING PROTEIN 71 370 - -
Gso19g1740 371 SUPERFAMILY Cysteine proteinases 185 370 IPR038765 -
Gso19g1740 371 Gene3D - 205 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1740 Gso-Chr19 46278069 46281385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1740 K18342 - gmx:100780620 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1740 19 46278069 46281385 Gso3g1774 3 43521262 43525026 GST