Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1729 ATGCAGGAAGCGACGAAGGTGATAATAATCGGTGCCGGAACTTCTGGTATCGCCACCGCCGGTTGCTTAACGAAGCAATCAATACCTTACATAATGCTCGAGAGAGAAGACTGTTTCGCTTCGCTGTGGCAGAAATACACCTACGATCGTCTCCACCTTCATTTGAGGAAGCAAGTTTGCGAGTTACCGCACTTACCGTTTCCCAAGTCTTACCCTCACTACGTGCCTCGGAAGCAGTTCATAGACTACTTGGGAAACTACGTTAACCACTTTGAGATCAAGCCTCTGTACCAGCGTGCAGTGGAGTTGGTGGAGTATGATGGATGGAAAGGGATTTGGAGAGTGAAGGCTCAGAATAGAAGATCTGGTGAGCTTGAGGAATACGCTGGAAAGTACCTGGTCGTGGCCAGTGGCGAAACCGCCGAGCCTCGTCTGCCTCAGATTCAAGGCTTGGAGAGTTTCAATGGAAAAGTGATTCACTCAACTGCCTACAAAAACGGGAACGAGTTTAAGAATAAACATGTTCTGGTTGTCGGATCTGGCAATTCCGGCATGGAGATTGCGCTAGACTTGTCCAATTTTGGTGCCAAACCTTCCATCATTGTTCGCAGCCCGGTTCATTTTCTTTCGAGGGATATGATGTATTATGCGTCGCTTATGCTGAATTACTTGTCGCTGAGTACGGTGGAGAAGGTGTTGGTGATGGTTAGCAAGGTTGTGTATGGAGATCTGAGTGAGTATGGGATACCGTATCCGAGTGAGGGGCCTTTCACCATGAAGATGAAGTATGCCAAGTTCCCAATCATCGATGTAGGAACTGTCAAGAAAATTAAATCTCGAGAGATACAGGTGTTGCCAGCTGAAATAAAGAGTATAAGAGGTAATGAAGTTTTGTTCCAGGATGGCAAATCGTACACATTCGACTCAATTGTTTTCTGTACAGGCTTCAAGAGATCAACTCAAAAGTGGCTTAAGGGGGGTGATGATCTTCTAAATGAGGATGGCTTTCCAAAAAACAGTTTCCCAAATCATTGGAAAGGTCGAAATGGTTTGTATTGTGTTGGGCTGTCAAGAAGGGGTTTCTTTGGAGCTAACATGGATGCCCAATTAGTAGCAAATGATATTGCCTCGTTAATTCCTCAAGAAGAAAGAGAAGGAATTTGTGTCATGTAA 1173 0.4518 MQEATKVIIIGAGTSGIATAGCLTKQSIPYIMLEREDCFASLWQKYTYDRLHLHLRKQVCELPHLPFPKSYPHYVPRKQFIDYLGNYVNHFEIKPLYQRAVELVEYDGWKGIWRVKAQNRRSGELEEYAGKYLVVASGETAEPRLPQIQGLESFNGKVIHSTAYKNGNEFKNKHVLVVGSGNSGMEIALDLSNFGAKPSIIVRSPVHFLSRDMMYYASLMLNYLSLSTVEKVLVMVSKVVYGDLSEYGIPYPSEGPFTMKMKYAKFPIIDVGTVKKIKSREIQVLPAEIKSIRGNEVLFQDGKSYTFDSIVFCTGFKRSTQKWLKGGDDLLNEDGFPKNSFPNHWKGRNGLYCVGLSRRGFFGANMDAQLVANDIASLIPQEEREGICVM* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1729 390 Pfam Flavin-binding monooxygenase-like 5 317 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gso19g1729 390 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 3 390 - -
Gso19g1729 390 PIRSF FMO 3 370 IPR000960 GO:0050660|GO:0050661
Gso19g1729 390 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Gso19g1729 390 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Gso19g1729 390 SUPERFAMILY FAD/NAD(P)-binding domain 171 379 IPR036188 -
Gso19g1729 390 Gene3D - 1 381 IPR036188 -
Gso19g1729 390 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 3 390 - -
Gso19g1729 390 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gso19g1729 390 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Gso19g1729 390 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Gso19g1729 390 SUPERFAMILY FAD/NAD(P)-binding domain 3 215 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1729 Gso-Chr19 46185620 46188346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1729 K11816 - gmx:100777958 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1729 19 46185620 46188346 Gso3g1762 3 43432572 43436447 GST