Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1717 ATGGAGGGTGAGGGTGCAGCAGTGTGGCAAGGTGCGGTTTTAGGTGGAATAATCTTCTGGCTTGTTTCTGCTTCATACCTCAACGTTACTCGCAAACTTAGGTCTTTCTTACAACCTTGGGTTACTCATCACGTTGTCACTCAAACCCCTATTATCCTCAAGATCCAGAGTTACGGGTTTGGGTTCCTGGATGCACTTTTCTCTGGGTTGTCTTGCGTTGTTTCTGTGCCCTTCTACACTGCTTTTCTCCCTCTGCTATTCTGGAGTGGTCATGGCAAATTGGCGAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATCTTGGAAACTGCATAAAGGATGTGGTTTCAGCTCCAAGACCTGCTTCTCCACCTGTCAAGAGAGTAACTGCCACCAGAGATGAAGAGGATAATGCGTTAGAATATGGATTGCCTTCCTCTCACACACTTAACACAGTTTGCTTATCTGGCTACCTTTTGCACTATGTCCTGACTCATACTCAAATTCAAGGTGCCTATGTTACTTATCTTGGAGTTTCTCTTGCCTGCATGCTGGTGTTTTTCATTGGTTTGGGAAGAATTTATCTTGGCATGCATAGTGTGGTTGATGTTCTTGCTGGCCTTCTTATTGGACTCGTTGTCCTTGCATTTTGGCTTACGGTTGATGAATACATGGACAGTTTTGTGATCTCAGGACAAAATGTTACGTCCTTTTGGGCTGCCTTGAGCTTTCTCTTGCTTTTTGCTTATCCAACTCCTGAACTTCCAACTCCAAGCTTTGAGTATCACACTGCTTTCGATGGTGTTGCATTGGGAATTGTCTCTGGGGTGCAACAAACATACCATCAATTTCACCATGCCAATGTTCCTCGTTTGTTCTCGTCAGAGCTGACTATACCTGTATTTCTGGGAAGGATGCTATTGGGAATACCTACAATTCTAATTGTGAAGTTCTGCAGTAAGACTCTCGCAAAATGGACCATTCCTGTGGTAGCGAACACCTTGGGCATCCCAATAAAATCAACCGGCTATATACCTACACTGAATGGATCTGTGACAGGTAAAATGTCTGATAAGCTTAAACAAGGTTACTTGCAAAAGCTCCTTTCCCAGCACAAGGCATTCGATGTTGATACCGGAATTAGATTTGTTCAGTATGCAGGGCTTGCCTGGTCTGTAGTTGACCTAGTGCCATCTCTTTTTTCATACATGAGCTTGTGA 1221 0.4406 MEGEGAAVWQGAVLGGIIFWLVSASYLNVTRKLRSFLQPWVTHHVVTQTPIILKIQSYGFGFLDALFSGLSCVVSVPFYTAFLPLLFWSGHGKLARQMTLLMAFCDYLGNCIKDVVSAPRPASPPVKRVTATRDEEDNALEYGLPSSHTLNTVCLSGYLLHYVLTHTQIQGAYVTYLGVSLACMLVFFIGLGRIYLGMHSVVDVLAGLLIGLVVLAFWLTVDEYMDSFVISGQNVTSFWAALSFLLLFAYPTPELPTPSFEYHTAFDGVALGIVSGVQQTYHQFHHANVPRLFSSELTIPVFLGRMLLGIPTILIVKFCSKTLAKWTIPVVANTLGIPIKSTGYIPTLNGSVTGKMSDKLKQGYLQKLLSQHKAFDVDTGIRFVQYAGLAWSVVDLVPSLFSYMSL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1717 406 Pfam PAP2 superfamily 98 221 IPR000326 -
Gso19g1717 406 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 36 224 IPR036938 -
Gso19g1717 406 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 126 234 - -
Gso19g1717 406 SMART acid_phosph_2 95 219 IPR000326 -
Gso19g1717 406 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 7 405 - -
Gso19g1717 406 CDD PAP2_SPPase1 62 219 - -
Gso19g1717 406 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 7 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1717 Gso-Chr19 46055713 46061229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1717 - - gmx:100778490 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1717 19 46055713 46061229 Gso3g1747 3 43297451 43301823 GST