Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1701 ATGGATTTGGAATCTTCTGGCGATTCGGTGAAATGTTGCAAGCACTGTGAATGCGGGTGTAGTGATTGCTCCATGGCAGCTCAATCTTCAGGGAATTGGCTCCGGTCTGTGAAAAGGAAGCACAAGCAGTTGGAACAGGGCGGCCAATTCTCTGCGCCAGGGCCGGATTGCGATCCGGTGGCGCATGTCGAGATTGGGAATGAATGTGATGCATTACGTGAGGCTGTTAGCAGCCAACAGAAATCAATAAAGGATTTGTATGAAGAATTGGAGGAGGAGAGGAATGCGGCCTCCTCGGCCGCGAATGAGACCATGACAATGATATTGAGGTTGCAGAGGGAAAAGGCAGAGCTTCAGCTGGAAGCGCGGCAGTTCAAGAGATTTGTGGAAGAGAGGACATCTCACGATCAGCAGGAGCTTCTTGCATTGGATGAATTGTTGTATAAGAGAGAACAGGCAATTCACTCACTCACGTGTGAGGTGCAGGCTTATAAGCACAGGTTGATGAGTTTTGGCATCACTGAATCGGAGGCAGAAGGTGATCAGTATAAATTTCCCCCTTATGAGTACCCTCCTTTGAGATGTAATGCAATGCATGCTTCAAGTGATGATAATGATGAGATAGACATTGACAAATATGCGTTTGGCGAAACACCTAAGGACCGTTTGAGGAACCTGGAAAGTAGGATATCTCAAATGGAGAGAAGTCCCACTTATAGTCAGATGGATGGGGAATTCAGTGGAAAAAATATTCTAGAGAAGGTGATAGTTGGACAGTCTCCAAGATGGGCTAAACATTCCAGGAAATTTTCCTGTGACTCATCTTCATTGTGCCCTGAGTATATGATTGATTCTCCTAGCTTTAGGAAGATAGATGAGGACCTTTCCAATTTGAAGAAGGTAGACAATGCATCAGAAGCTGGTGATGATATGATTGATAAAGTCTATACAATTGACTCCGAGTTCAAAGCTGGAGCTAGTGTTTACGATGATTATGCAACCACTCCAAGGGATTTTGTTAATCATGCAGATTTTGAAGATCCATATGTGAAGAAGCTTTGCATGAGGCTTCAAGAACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTATTTTGTTGAAGGAAATAGCTCAAGAATTGTGCAAAGAGATGTCACAGCAGAAAAAAATGACAGCGAGATCCTTTATTAGCAGCTTTTCATTCTTGACAGTTTTTAAGTGGATTGCATCAATTGTTTTCTGGAGAAAGAAAGCTCATCAAATCAAATATATGTTGGGGCTACCATCTGACAGCGCGGGCTTGCTAATGCTGCTTGACAAGGGACCCCATGTAAGGTCATGGAGATATCTTCAAAGTACACAAGTGGGAGATTAG 1407 0.4371 MDLESSGDSVKCCKHCECGCSDCSMAAQSSGNWLRSVKRKHKQLEQGGQFSAPGPDCDPVAHVEIGNECDALREAVSSQQKSIKDLYEELEEERNAASSAANETMTMILRLQREKAELQLEARQFKRFVEERTSHDQQELLALDELLYKREQAIHSLTCEVQAYKHRLMSFGITESEAEGDQYKFPPYEYPPLRCNAMHASSDDNDEIDIDKYAFGETPKDRLRNLESRISQMERSPTYSQMDGEFSGKNILEKVIVGQSPRWAKHSRKFSCDSSSLCPEYMIDSPSFRKIDEDLSNLKKVDNASEAGDDMIDKVYTIDSEFKAGASVYDDYATTPRDFVNHADFEDPYVKKLCMRLQELEADRESMRQAIISMRTDKAQLILLKEIAQELCKEMSQQKKMTARSFISSFSFLTVFKWIASIVFWRKKAHQIKYMLGLPSDSAGLLMLLDKGPHVRSWRYLQSTQVGD* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1701 468 Coils Coil 350 377 - -
Gso19g1701 468 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Gso19g1701 468 PANTHER BNAANNG28530D PROTEIN 1 443 - -
Gso19g1701 468 Coils Coil 69 128 - -
Gso19g1701 468 Pfam Zein-binding 71 161 IPR007656 -
Gso19g1701 468 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1701 Gso-Chr19 45934352 45938364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1701 - - gmx:100797605 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1701 19 45934352 45938364 Gso3g1732 3 43177602 43181545 GST
Gso19g1701 19 45934352 45938364 Gso2g1414 2 26881099 26885469 PCT
Gso19g1701 19 45934352 45938364 Gso10g0795 10 11317455 11321686 PCT
Gso2g1414 2 26881099 26885469 Gso19g1701 19 45934352 45938364 PCT
Gso10g0795 10 11317455 11321686 Gso19g1701 19 45934352 45938364 PCT