Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1689 ATGGTGAAAAAAGGAAACATTGTGCAGTATCGGGAAAGGTTGGACAACACCCTTGCCTTACCTGATCTGACAAATGAACAGATACTCAAAACGCTTGTCAAAAGTCAACTCCAACGTTCTTCAGAAGTGGAAATTGAAGGATGTAATGAGAAAGAAGTTGAAACCAAGACTACAGAGTTATGCAACCTTCTTGATATGTTGAGAAGTGCTTCTGGAGACAATGGTGGAGGATCTAGTAGTACATCACACGCTGATTGGAAATTAAAACAGGATAATGAAGAGTTTCGTGTTATGTATCGTGAAGGACCAGAGGGAACTCCCATTCATACATTGCTAGTTGAAGGCTATGTAGATGGGCCTCTAGATCTTTCTTTATGCCTTTCATGGGAGACCCCCCTCTACAAGAAATGGTGGCCTCAGTTTACTCTTCCCAGTTTCAAAGTTTTAGTATCTGATCGTTTGCAAAGGGTCCAAATTGGGGAACAAATATCACTAGTTAGGATGAAGGTTCCATGGCCACTATCTACAAGGGAGGCTATAGTGCATTATTATCTGTTTGAGTACTTTCAAGATGACTTAGTAGTTATTCTTTTGAATACGGTCTCTGAGTCAAAAACTGATAATTTAAACAAGGATGCAATTCCTGAAGCAAAGGATGTCGTGAGAATTGATTTAGTGGGAGGCTATGCTATGCAAAAGGTGACATCAGAAAGAAGTTATTTTCGGATAATAGCAAATTTGGATTTAAAGCTGGATTTTCTACCTCCAACCCTCCTAAATTTCATTTCAAGGCAGCTCATCGGCAGTGGTTTCAGGCTTTATCAGAAGGCAGTAACTTCTATGATGGGCAATGATAAAGACAAAGACTTCAGCAAGGCTTTGGAGGACACGTTGTATGTTAGAATACACGAAGCTCTATTAAGCACTAGGGAATCAAAGGCTATGGCTGGGGAAGAGCTTAAGCAAGATGCAAGCATTGTTCCTACTGAAGAACTTGTTCAAAGTGAGGATGAGGCAAAAGATGTAACCTGTGAGGATAGCAGCAACCAGTGTTCAAATAATTACATTGGAGAGACTTTAGATGCAGGTAGTGAAGAAGTTGTTGAAGCAGATTGTAAAGAAATTTTGCAAATTGAAGAGGATGTCAATAAGGTACTTAGCATTCCAATCGAGGAAGGTAATTCATTAAGTGTACTGATGGGAAAGGAAAATGGTGAGATTGTAGAAACAGATAGTGAAGAGATTGTTGAGATTGAGATGGATGTCAACAAAATGCATGACCTTCCAGTTGAGGAAGATGGTACAAAGAGTGTACTGAAGGACAGAATGAATGCATATATACGCTCAGATGTGAGAAATGCTCTAGAAACAATAGAGAGGGTTATTTCAGTGGTTAGAGAATGTGGATTTCATTCCCTCGGGTCCACTTTAAACTCTGCTGGTGAAGAGTTCCACTGCATGGAAAATGGTGGCACAGTTGATTCAGATTCTGCAAAAGTTATTGAAGTATGTTTGAAAAATGAGGTTAGTGTCAAAGTATCAAGCAGCAATATGCTGGAGGAAAATTTAGAAGAACCTGGGACGATACAAAGCTTCAGACACACAGGAACAAATGCTAACAAGGAAGTAAACTATAAGAAAGTAGTACCAGCTTCACCAGAGCAGAATCTTTCAAGACCAATGGAAGCAAACCAGGCTGATTCATATTCTTTGAAAAATGGGACAACTCTGGACCAAACAATATATGATAACAAGCAATTAAACAGTGATGCAGTCCAAGATATGTCTTCAGATGACCTGAAAAAGTCAACCAGGGAGATAAAGTATCGATACTGTTGTTTTATGCATTAA 1851 0.3928 MVKKGNIVQYRERLDNTLALPDLTNEQILKTLVKSQLQRSSEVEIEGCNEKEVETKTTELCNLLDMLRSASGDNGGGSSSTSHADWKLKQDNEEFRVMYREGPEGTPIHTLLVEGYVDGPLDLSLCLSWETPLYKKWWPQFTLPSFKVLVSDRLQRVQIGEQISLVRMKVPWPLSTREAIVHYYLFEYFQDDLVVILLNTVSESKTDNLNKDAIPEAKDVVRIDLVGGYAMQKVTSERSYFRIIANLDLKLDFLPPTLLNFISRQLIGSGFRLYQKAVTSMMGNDKDKDFSKALEDTLYVRIHEALLSTRESKAMAGEELKQDASIVPTEELVQSEDEAKDVTCEDSSNQCSNNYIGETLDAGSEEVVEADCKEILQIEEDVNKVLSIPIEEGNSLSVLMGKENGEIVETDSEEIVEIEMDVNKMHDLPVEEDGTKSVLKDRMNAYIRSDVRNALETIERVISVVRECGFHSLGSTLNSAGEEFHCMENGGTVDSDSAKVIEVCLKNEVSVKVSSSNMLEENLEEPGTIQSFRHTGTNANKEVNYKKVVPASPEQNLSRPMEANQADSYSLKNGTTLDQTIYDNKQLNSDAVQDMSSDDLKKSTREIKYRYCCFMH* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1689 616 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 616 - -
Gso19g1689 616 PANTHER START-2 DOMAIN PROTEIN 1 616 - -
Gso19g1689 616 Gene3D - 84 285 IPR023393 -
Gso19g1689 616 SUPERFAMILY Bet v1-like 81 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1689 Gso-Chr19 45826472 45831735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1689 - - gmx:100792855 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1689 19 45826472 45831735 Gso3g1721 3 43070586 43076037 GST
Gso19g1689 19 45826472 45831735 Gso2g1642 2 38662173 38668234 PCT
Gso19g1689 19 45826472 45831735 Gso10g0741 10 10420721 10426690 PCT
Gso2g1642 2 38662173 38668234 Gso19g1689 19 45826472 45831735 PCT
Gso10g0741 10 10420721 10426690 Gso19g1689 19 45826472 45831735 PCT