Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1668 ATGGATCCATCCCATGATGAAAGAGGACCCCCAAATGAATCATTAACCCACCAGTCCTCTTCCCGTAGGCATGGGGATGCACCACCACCGACGGTGGCACCACCGCAAATGATGTATTATTACCCGCAAGGGTATGCCCCACAACCCATGCCTCACCAAGGTTACCCACCAGGTTATGCCCCATACCCTAATGAGTACCATCAACAACCATACCATTACCCCGCAGGTCCCTACTTTAGCACTCCACCGACCTATCACAATGGTGGCGGAAGCAAAGCCTTCATTCGTGGCTTCATAATGTGTTCATGTTTAATATTCACATGCCTCTTTGTTGCCACCCTTATTATGGCGCTAGTGTTGCACCCCCAATTACCCGTTTATACGATTAATTCCTTGTCTGTGGCAAATTTCAACACCACTCAATTGTTAACCGCAAATTGGAACACTAGCATCATGATCCATAACATCAACAATAGGCTAATTGGTTTATTTTCTGATTTTAAGGTGGATTTGTTGCACAAAAATTACATAGTAGCAGTGAGTTATGTGCCTAATTTCGAGTTGAACAAGAACGAGGTTAAGCGAATTGATGCGACACCATTGTCAAATGGATTCTCATTCCCAAAGTCGAACTTGGATGACATGGCAAAGGAGCAAGCCGGTGGGTCCGTCACATTTGCTTTGAGGATGACTTCCATGGTCACGTTCATGTCTAGCACAATGTCCACAAGAAACACGTTGATACTAGCACTTTGCAGTGGCTTGAAGGTTGTGTTTCAAAACAACACTGGCAACGGAGTGTTGGACAATGCGGGAAAGCCCATCAGTTGCCAACTTTATATGTGA 846 0.4527 MDPSHDERGPPNESLTHQSSSRRHGDAPPPTVAPPQMMYYYPQGYAPQPMPHQGYPPGYAPYPNEYHQQPYHYPAGPYFSTPPTYHNGGGSKAFIRGFIMCSCLIFTCLFVATLIMALVLHPQLPVYTINSLSVANFNTTQLLTANWNTSIMIHNINNRLIGLFSDFKVDLLHKNYIVAVSYVPNFELNKNEVKRIDATPLSNGFSFPKSNLDDMAKEQAGGSVTFALRMTSMVTFMSSTMSTRNTLILALCSGLKVVFQNNTGNGVLDNAGKPISCQLYM* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1668 281 PANTHER PROTEIN, PUTATIVE-RELATED 33 278 - -
Gso19g1668 281 SUPERFAMILY beta-sandwich domain of Sec23/24 22 85 - -
Gso19g1668 281 MobiDBLite consensus disorder prediction 1 35 - -
Gso19g1668 281 SUPERFAMILY Cytochrome c oxidase subunit III-like 76 158 IPR035973 GO:0009055|GO:0016020
Gso19g1668 281 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 33 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1668 Gso-Chr19 45595440 45596517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1668 - - gmx:100808758 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1668 19 45595440 45596517 Gso10g0706 10 9574946 9576353 PCT
Gso10g0706 10 9574946 9576353 Gso19g1668 19 45595440 45596517 PCT