Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1641 ATGTCTCAGACGAAGAAATTGACGCCGAATCTGGATCAGCAGAGCACGAAGGTGCTGAATCTCACGGTGCTCCAGCGAATCGATCCGTTCATCGAAGAGATTCTCTTCACCGCCGCGCATGTCTCCTTCTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGGATGTTGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAACCACGGTTTCAGTTCATCGTCATGAATCGACGGAATACAGATAACCTAGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCGTACCTGTTGTATCGGAATGCTGCTCAAGAAGTTAACGGAATATGGTTTTACAATCCAGATGAATGTGAAGAAGTTGCAAATCTCTTTAACAGGATACTTAATGCATACCCAAAGACTGCTCCAACTACAGTACTGCCTGTTAACATAAGTGAGTCTGAGGAACTTCAGCCAGTGTCAATTATCCCGGAAAGCCCTCTAGAGTCGTCTTCAGCTACTGCTTCTGCAATTGATGCTGTTGAAGATCCTGCAAATACAAACTTCTTAAGCACATTGAAGGTTACTGGAAATTATGCTTCCAATATGGAAAATTTTAGACAGCATTCTGCAACTGTCACTTCTGCTCCTAGTGGTTTATTCTCTACTGCACCTGCTGTGCAAATTCCATCTGCCTCTCATTCAACTTCATCGATATCAGGCTTCCCTCTTGACTCTCTTGAAACAGCCAAGAGTGGCAATCAAATCATTAATCTTGTTAAGCCTTCCACGTTTTTTGCATCGACGTCTTCATCTTCACTGTTAGTTCCACCTATTTCTTCATCTGTGCAACCTAGTGCAGCTGTTCAACATTCCCTGAATCTGCCACGCCAATATGGCACTCCAGTACTTCAACCCTTCCCTCCCCCTAACCCTCCTCTTTCTCTTACCCCTATTTCAAGCTCCACTCCAAATAGACCTGTATTCAGCAGGGATAATGTCCGTGATGCACTTTTATCATTGGTTCAGGAGGATCAATTCATTGACATGATGTTCCAGGCATTACTGAAGGTGAGTCATTCATGA 1080 0.4361 MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIEEILFTAAHVSFYDFNIESNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNAYPKTAPTTVLPVNISESEELQPVSIIPESPLESSSATASAIDAVEDPANTNFLSTLKVTGNYASNMENFRQHSATVTSAPSGLFSTAPAVQIPSASHSTSSISGFPLDSLETAKSGNQIINLVKPSTFFASTSSSSLLVPPISSSVQPSAAVQHSLNLPRQYGTPVLQPFPPPNPPLSLTPISSSTPNRPVFSRDNVRDALLSLVQEDQFIDMMFQALLKVSHS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1641 359 MobiDBLite consensus disorder prediction 306 325 - -
Gso19g1641 359 CDD EVH1-like_Dcp1 19 133 - -
Gso19g1641 359 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Gso19g1641 359 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 356 IPR010334 GO:0000290|GO:0008047|GO:0043085
Gso19g1641 359 Gene3D - 7 135 IPR011993 -
Gso19g1641 359 PANTHER DECAPPING ENZYME 1A, PUTATIVE-RELATED 1 356 - -
Gso19g1641 359 SUPERFAMILY PH domain-like 19 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1641 Gso-Chr19 45328113 45331900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1641 K12611 - gmx:100780081 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1641 19 45328113 45331900 Gso3g1668 3 42574936 42578578 GST