Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1638 ATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGCAATATATAACAATTGGTGGCCAATGTTATCAGCTCTGATGTATGTGCTGGTTCCTATGCCTTGCTTATTCTTTGGAGGTGGATCCACTCAATTTCTAATGACCCGTGATGGTGGTGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCTGTTGGGAGCTTAGCCATTCCTATCATTCTCAAGCACGCTCATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCATTCTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAGCCTTGATGATGATTGGTAA 342 0.4152 MFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMTRDGGGWIDAAKFLTGASAVGSLAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQASLDDDW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1638 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
Gso19g1638 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
Gso19g1638 113 PANTHER RH04491P 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1638 Gso-Chr19 45290439 45293389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1638 1 108 EF-hand Containing Proteins AT1G32410 56.757 3.90e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1638 - - gmx:100306519 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1638 19 45290439 45293389 Gso3g1664 3 42542124 42545059 GST