Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1613 ATGGAGCACCTTCCTGTTGAAGTGATTGGTAACATATTATCTCTTCTCGGTTCTGCCCGAGATGTTGTGGTTGCTTCTGTAACTTGTAAAAAATGGAGGGAAGCATGGCGCAATCACCTCCACAGTCTTTCATTCAACTACTGTGATTGGCCCCTCTTTCATGACTTTACCTCTGCTAGGTTGGAAATACTCATCACTCAGACAATCTTCCAAACCAAGGCACTGCAATCCCTGACCATATTCTTGGATGACGAGCACAAGTTCTCGGCTGCCCCGGTCATTGCTTGGCTTATGTATACTAGGGATTCGTTGCGCCAATTGCTTTACAATGTGAGGACAACCCCTTGTTTCAACATCATTGAGAAATGCAGCAGGCAGAGGTTGGAGGTGTTGGCCTTGGCTCGCAATCCGATCACCGGTGTTGACCCAAGCTACTTGAAGTTTCCTTGCTTGAAGTCGCTTTCGTTGAGTTTTATTAGCATCTCGGCGTTGGATTTGACCCTTCTTCTCTCTGCGTGTCCGAAGCTTGAAACCTTGGCTATGGTTGGTGTGGAGATTGCAATGTCAGATTCGCAGGCTTCCGTGGAGCTTAGCAGCGTTTCTTTGAAGTTTTTTGACCTTGAATTGTTTAGTTCGGATAAGTTTATATTGGAGGCGGATTTACTTGAGAAGCTTCATTTGAAAGATTGTAGCTTTGAGGCTTTTGAGCTGATTGGAAAGGGGACATTGAAGGTTTTGAAAATTGATGATGTGAATATTATCCATCTTGATATTGGGGATAGTACAGAAAACCTTGAGATTATAGATGTCTGTAACTTCACAGTCATGTGGCCAAAATTTTATCATATGATCTCAAAAGCATCAAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGACGAGGTTGTTGATATAGAGACAATTTCTGTTTGCTTTCCTCAGTTGACACATTTGTCCTTAAGTTATGATTTAAGAGATGGAGTTCTTCATTATGGTTTGCAGGGTTTGTCTTGTTTGATGAATGTGGTGGTGCTGGAACTTGGATGGACTGTAATTAGTGATCTCTTCTCAGTATGGGTAGCTGGACTTTTGGAAGGTTGTCCCAATTTGAAAAAATTGGTCATTTATGGTTTTGTTTCAGAGGTCAAAACACATGAAGAGTGTCAAATTCTTGCCAGATTCTCAGAATTCATTCTTCAACTTGGAAGAAAATATGGGCATGTAAAGTTTGAGTTTGAATATGAGTAG 1260 0.4151 MEHLPVEVIGNILSLLGSARDVVVASVTCKKWREAWRNHLHSLSFNYCDWPLFHDFTSARLEILITQTIFQTKALQSLTIFLDDEHKFSAAPVIAWLMYTRDSLRQLLYNVRTTPCFNIIEKCSRQRLEVLALARNPITGVDPSYLKFPCLKSLSLSFISISALDLTLLLSACPKLETLAMVGVEIAMSDSQASVELSSVSLKFFDLELFSSDKFILEADLLEKLHLKDCSFEAFELIGKGTLKVLKIDDVNIIHLDIGDSTENLEIIDVCNFTVMWPKFYHMISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPQLTHLSLSYDLRDGVLHYGLQGLSCLMNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVIYGFVSEVKTHEECQILARFSEFILQLGRKYGHVKFEFEYE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1613 419 Gene3D Ribonuclease Inhibitor 61 196 IPR032675 -
Gso19g1613 419 PANTHER F-BOX/LRR-REPEAT PROTEIN 1 417 - -
Gso19g1613 419 SUPERFAMILY F-box domain 1 67 IPR036047 GO:0005515
Gso19g1613 419 Gene3D Ribonuclease Inhibitor 197 404 IPR032675 -
Gso19g1613 419 Pfam F-box-like 2 36 IPR001810 GO:0005515
Gso19g1613 419 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
Gso19g1613 419 SUPERFAMILY RNI-like 126 381 - -
Gso19g1613 419 SMART fbox_2 4 47 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1613 Gso-Chr19 45104534 45106648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1613 - - gmx:100792331 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1613 19 45104534 45106648 Gso3g1636 3 42355023 42357090 GST