Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1575 ATGCATTCCGGTCACTTACTTCTCGAGGAACCCATTCGCATGGTTTCCATCCTCGAACCATCCAAGCCTAATTTCTTTCCGGCAATGACGAAGATCGTTGGTACCCTGGGTCCTAAATCTCGATCGGTCGAGGTTATTTCTGCTTGTCTCAAAGCTGGAATGTCAGTGGCTCGTTTCGACTTCTCTTGGGGTGACCCTGAATATCATCAGGAAACTTTGGAGAATCTGAAGAATGCTATCAAGACTACTAAGAAACTCTGTGCTGTTATGCTGGACACTGTTGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAAGCGATCTCGCTCCAGGCCGATGGTCAGGTTGTTCTGACTCCAGACCGGGGACAAGAAGCGTCTTCGCAGATACTGCCGATCAATTTCGATGGATTGGCAAAGTCAATGACGAAGGGAGACACCATTTTTATTGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCCGTATGGCTAGAGGTATCTGAAGTTAAAGGGCAGGATGTCATTTGTACTATAAAGAATTCGGCAACATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAGTTCATATTGACTTGCCTACCCTCACCGATAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTATCATTGTCATATACTAGGCATGCTGAAGATGTCCGCCAGGCACGTGAATTCCTTTCTAAGTTAGGTGATCTAAGCCAGACTCAAATATTTGCAAAAATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACGAGAAGCAGATGGTATTATCCTTTCCCGTGGGAATTTGGGCATTGATCTTCCCCCGGAGAAGGTATTTTTCTTTCAAAAATCTGCCCTATACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTAGGTGCTGAGACCTTACGCGGGTTATACCCTGTTGAGACTATTTCCACAGTTGGCAAAATTTGTGCAGAAGCTGAGAAAGTTTTCAATCAAGATCTTTATTTTAAGAAAACCGTCAAATATGTTGGAGAACCCATGACCCACTTGGAATCTATTGCATCCTCTGCGGTACGAGCAGCTATTAAGGTGAAGGCTTCTGTTATTATTTGTTTCACTTCTTCTGGAAGGGCTGCAAGATTGATAGCAAAATATAGACCAACCATGCCGGTTCTCTCTGTTGTGATCCCCCGACTCAAGTCAAATCAGCTGAAATGGAGCTTCAGTGGAGCTTTTGAGGCTAGGCAATCACTTATTGTCAGAGGTCTCTTTCCCATGCTTGCCGATCCCCGACATCCTGCCGAGTCAACAAGTGCCACAAACGAGTCTATTCTAAAGGTTGCCCTTGATCATGGAAAAGCATCAGGAGTTATAAAGTCACACGATCGAGTAGTTGTTTGCCAGAAAGTTGGTGATGCATCCGTAGTTAAGATTATCGAGCTTGAAGATTAA 1584 0.4375 MHSGHLLLEEPIRMVSILEPSKPNFFPAMTKIVGTLGPKSRSVEVISACLKAGMSVARFDFSWGDPEYHQETLENLKNAIKTTKKLCAVMLDTVGAEMQVVNKSEKAISLQADGQVVLTPDRGQEASSQILPINFDGLAKSMTKGDTIFIGQYLFTGSETTSVWLEVSEVKGQDVICTIKNSATLAGSLFTLHASQVHIDLPTLTDKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENVEGLTHFDEILREADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKSNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDHGKASGVIKSHDRVVVCQKVGDASVVKIIELED* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1575 527 SUPERFAMILY PK beta-barrel domain-like 101 186 IPR011037 -
Gso19g1575 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Gso19g1575 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 375 IPR015813 GO:0003824
Gso19g1575 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Gso19g1575 527 PANTHER PYRUVATE KINASE 2 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso19g1575 527 Gene3D - 30 370 IPR040442 -
Gso19g1575 527 SUPERFAMILY PK C-terminal domain-like 358 520 IPR036918 -
Gso19g1575 527 Gene3D - 371 513 IPR036918 -
Gso19g1575 527 PANTHER PYRUVATE KINASE 2 527 - -
Gso19g1575 527 TIGRFAM pyruv_kin: pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1575 Gso-Chr19 44674913 44682080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1575 K00873 - gmx:100781158 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1575 19 44674913 44682080 Gso3g1594 3 41860967 41868170 GST
Gso19g1575 19 44674913 44682080 Gso10g0562 10 6344774 6350881 PCT
Gso10g0562 10 6344774 6350881 Gso19g1575 19 44674913 44682080 PCT