Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1561 ATGAAACTCTTGGAAAAGGATTTCGCGGTGAACCAAACCGGAACTGCGAAGCTCGTGGCCGAAGAACCCGACGACGTGTGGCTCCTCTACAACCTCATCCTCCCCGGCGACATCGTTTCGACCGACACCACCCGCAAGGTCCACCTCGATTCCTCCGCCAAGAAGAACACCGCCTCACGTGTGAAACTCACCCTCGACATCAAAGTCACGTGCCGTGACTTCCACAAAGACTCCTCCACTCTCCGACTCCACGGCCGCAACCTCCAACCCAACCAGCACGTCGCCGCCGGCTCCTTCCACACCCTCACCCTCGAACCCCACAAACCCTTCCACCTCCGCAAGAAGCTTTGGCAAAACGACGCCGTCGAAACCCTAAACGAATCCACCGAGAATTCCAATCCCAATACCAATTCCCCCGACCTCGCCGTCGTTCTCTTCCACCCGCACCATGCGGAGATTCACCTTATCGCACAGGGAGTCGCCACGCGCTGCACCAAGATCGAACCCTCTTCAAACTCCAGAAACTCCGTGTATTTCCGACAGGTGTTCGCGGCGTTCGTGAAGCGCGTGGATTTTAAGGTTGTGAAGCGCGTGGTGATAACGAGCGAGGAGTTTCGTAGGTTTGTGATGTCGGAAGCGAGGAAGTCGAGGATGCGGTCGATCGAGGAGAACCAGTCGCGAATAATGGTCGTTGCGGGCGGTGATAGTTTGGAGAAAGTGATGGGTGACCGGGCGGTGATGGAGTTGGTGAAGGACAAGAAGGTGGCGGCGTTTAGAGAGTTGTGGGAGATGGTGTGCGACGATTCGGACCGCGCGTGTTATGGACCTGCGGAGGTGGAGCGTGCGCGTGAGATGAGGGCCATTGAGACACTTCTGATAACCGATGATCTTTATAGGAACGAAGATGTTGAGACGAGAAAAAAGTACGCGAGTTTGGTGAAGTCGGTGAAAGAGGGTGGAGGAAAGGCTTTGGTGTATTCGTCGATGCATGTTTCTGCACCGCAACTCGCTCAACTCACGGGTGTTGCGGCAATTCTCAGGTTTCCCTTGCCTGAACTCGAAGATGTAAATGGGTGCTGA 1080 0.5537 MKLLEKDFAVNQTGTAKLVAEEPDDVWLLYNLILPGDIVSTDTTRKVHLDSSAKKNTASRVKLTLDIKVTCRDFHKDSSTLRLHGRNLQPNQHVAAGSFHTLTLEPHKPFHLRKKLWQNDAVETLNESTENSNPNTNSPDLAVVLFHPHHAEIHLIAQGVATRCTKIEPSSNSRNSVYFRQVFAAFVKRVDFKVVKRVVITSEEFRRFVMSEARKSRMRSIEENQSRIMVVAGGDSLEKVMGDRAVMELVKDKKVAAFRELWEMVCDDSDRACYGPAEVERAREMRAIETLLITDDLYRNEDVETRKKYASLVKSVKEGGGKALVYSSMHVSAPQLAQLTGVAAILRFPLPELEDVNGC* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1561 359 Pfam eRF1 domain 1 1 128 IPR005140 -
Gso19g1561 359 Gene3D Pelota, domain A 1 131 IPR038069 -
Gso19g1561 359 Gene3D - 251 358 IPR029064 -
Gso19g1561 359 Pfam eRF1 domain 3 257 350 IPR005142 -
Gso19g1561 359 SUPERFAMILY L30e-like 254 355 IPR029064 -
Gso19g1561 359 SMART eRF1_1_2 1 130 IPR005140 -
Gso19g1561 359 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 129 IPR038069 -
Gso19g1561 359 PANTHER PELOTA 1 357 IPR004405 GO:0070481|GO:0070966|GO:0071025
Gso19g1561 359 SUPERFAMILY Translational machinery components 137 254 - -
Gso19g1561 359 Gene3D eRF1 domain 2 140 250 IPR042226 -
Gso19g1561 359 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1561 Gso-Chr19 44562800 44564514 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1561 K06965 - gmx:100803618 677.937