Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1553 ATGGCTTCCGAAGCAGCACCACACTTCGTCTTGTTTCCACTGATGGCTCAAGGCCACATGATCCCCATGATGGACATAGCAAAAATATTGGTGCACCGCAACGTTATTGTGACTGTAGTCACAACTCCACATAACGCAGCACGTTTCACATCAATCATTGATCGTTATATTGAGTCAGGGTTTCCTATAAGATTGGTTCAACTTCAATTCCCATGTGAAGAAGCTGGAGTACCAGACGGATGCGAGAATCTCGATATGATACCTTCACTTGCCACGGCCACAAGTTTCTTCAAAGCAACACAACTTCTACAACAACCAGCGGAAAAACTGTTTGAAGAGTTAACACCACCAAGCTGCATAGTCTCTGATATGTGTTTGCCATATACAACCCAAATCGCCAAAAAGTTCAATGTTCCCAGGATTTCTTTTGTTGGAGTAAGTTGCTTTTGTCTTCTGTGTATGCATAATATAAACATCCATAATGTTAGGGAGAGCGTAACATCTGAGTCAGAGTACTTTGTTCTGCCCGGTATCCCTGAAAAAATTGAGATGACCCTCGCACAGACTGGACAACCTATGAATGAAAGCTGGAAACAGATTAATGAAGAAATTAGGGAAGCTGAAATGTCTAGTTATGGAGTAGTCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAACGGGCTACAAGAAGATCAGAGGCGATAAATTGTGGTGTATAGGCCCTGTGTCTCTTATTAACAAGGATCATTTAGATAAGGCTCAAAGAGGTACGGCCTCAATAGATGTGTCGCAACACATAAAATGGCTTGATTGTCAGAAGCCAGGAACTGTAATCTATGCATGTCTTGGAAGCCTATGCAATTTAACAACACCCCAGTTGAAAGAGCTTGGTTTAGCCTTGGAAGCATCAAAAAGACCCTTCATTTGGGTTATCAGGGAAGGAGGTCATTCCGAAGAATTAGAAAAGTGGATTAAGGAATATGGATTTGAGGAAAGGACCAATGCTAGAAGCCTTCTCATTCGGGGATGGGCGCCTCAAATATTAATATTATCTCACCCTGCTATTGGAGGGTTTATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCCGGGGTGCCAATGCTTACGTGGCCACTATTTGCGGATCAGTTTTTGAATGAAAGCCTAGTGGTGCATGTACTAAAAGTTGGAGTGAAGGTTGGGGTGGAAATTCCGCTTACATGGGGTAAGGAAGTGGAAATTGGTGTGCAAGTGAAGAAGAAAGATGTTGAAAGGGCAATAGCAAAGTTGATGGATGAGACAAGCGAAAGTGAAAAAAGAAGAAAAAGGGTGAGAGAGCTTGCTGAGATGGCTAACAGAGCCGTAGAGAAAGGGGGATCCTCTTATTCTAATGTGACCTTGCTTATCCAGGATATCATGCAGAAAAACAAGAGAGATGTGTGA 1458 0.4252 MASEAAPHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTSIIDRYIESGFPIRLVQLQFPCEEAGVPDGCENLDMIPSLATATSFFKATQLLQQPAEKLFEELTPPSCIVSDMCLPYTTQIAKKFNVPRISFVGVSCFCLLCMHNINIHNVRESVTSESEYFVLPGIPEKIEMTLAQTGQPMNESWKQINEEIREAEMSSYGVVMNSFEELEPAYATGYKKIRGDKLWCIGPVSLINKDHLDKAQRGTASIDVSQHIKWLDCQKPGTVIYACLGSLCNLTTPQLKELGLALEASKRPFIWVIREGGHSEELEKWIKEYGFEERTNARSLLIRGWAPQILILSHPAIGGFITHCGWNSTLEAICAGVPMLTWPLFADQFLNESLVVHVLKVGVKVGVEIPLTWGKEVEIGVQVKKKDVERAIAKLMDETSESEKRRKRVRELAEMANRAVEKGGSSYSNVTLLIQDIMQKNKRDV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1553 485 Coils Coil 425 445 - -
Gso19g1553 485 Gene3D Glycogen Phosphorylase B; 268 461 - -
Gso19g1553 485 CDD GT1_Gtf-like 7 456 IPR002213 GO:0008194
Gso19g1553 485 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 279 398 IPR002213 GO:0008194
Gso19g1553 485 Gene3D Glycogen Phosphorylase B; 4 267 - -
Gso19g1553 485 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Gso19g1553 485 PANTHER GLYCOSYLTRANSFERASE 6 481 - -
Gso19g1553 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 480 - -
Gso19g1553 485 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 6 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1553 Gso-Chr19 44485218 44486843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1553 8 480 Glycosyltransferase AT2G36760 56.904 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1553 K13496 - gmx:100527132 963.37