Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1552 ATGGTTTCCGAAGCACAAAAGCCACACTTTGTCTTGTTTCCATTGATGGCCCAAGGCCACATGATCCCCATGATGGACATCGCAAAGATATTGGTGCACCGCAATGTTATTGTGACTGTGGTCACAACGCCACATAACGCAGCTCGTTTCACACCAATCTTTGATCGTTATATTGAGTCTGGCTTTCCTGTAAGATTGGTTCAACTTCAATTCCCATGTGAAGAAGCTGGAGTACCAAAAGGATGCGAGAATCTCGATATGATACCTTCACTTGCCACGGCCACAAGTTTCTTCAAAGCAGCAAACCTTCTACAACAACCAGTGGAAAAACTGTTTGAAGAGTTAACACCACCACCAAGCTGCATCATCTCTGATATGTGTTTGCCATACACAATCCACATCGCCAAAAAATTCAATATTCCCAGGATTTCTTTTGGAGGAGTAGGTTGCTTTTATCTTTTGTGTTTGCATAATATACGCATCCATAATGTTGGGGAGAACATAACATCTGAGTCCGAGAAATTTGTTGTGCCTGGTATCCCTGACAAAATTGAGATGACAAAAGCACAGGCTGGACAACCGATGAATGAAAGCTGGAATCAGTTTGGTTATGATGTTATGGCGGCTGAAATGGGTACTTATGGGGTAATCACGAATTCTTTTGAAGAGTTGGAGCCAGCATATGTAAGGGACTACAAGAATATCAGAGGCGATAAAGTGTGGTGTATAGGCCCTGTGTCACTCATTAACAAGGATCATTTGGATAAGGCTCAAAGAGGTAGGGCCTCAATTGATGTGTCCCAATACTTAGAATGGCTTGATTGTCAGAAGCCAGGGACTGTAATCTATGCATGTCTTGGAAGCCTATGCAATTTAACAACACCCCAATTGATAGAGCTTGGTTTAGCCTTGGAAGCATCAGAAAGACCCTTCATTTGGGTTATCAGGGAAGGAGGTCATTCAGAAGAATTAGAAAAGTGGATTAAGGAATATGGATTTGAGGAAAGCACCAATGCTAGAAGCCTTCTCATTCGGGGTTGGGCTCCTCAATTGTTAATATTAGCACACCCTGCTATTGGAGGGTTCATAACACACTGTGGTTGGAACTCTACAATAGAAGCAATATGTGCTGGGGTGCCAATGCTTACGTGGCCACTATTTGCAGATCAGTTTTTGAATGAAAGTCTAGTGGTGCATGTACTAAAAGTTGGATTGAAGGTTGGGGTGGAAATTCCACTTACATGGGGTAAGGAAGTGGAAATTGGTGTGCAAGTGAAGAAGAAAGATGTTGAAAGGGCAATAGCAAAGTTGATGGATGAGACAAGCGAAAGTGAAGAAAGAAGAAAAAGGGTGAGAGAGCTTGCTGAGATGGCTAACAGAGCCGTAGAGAAAGGGGGTTCATCATATTCTAATGTGACCTTGCTTATCCAGGATATCATGCAAAAAACCTAG 1452 0.4256 MVSEAQKPHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTPIFDRYIESGFPVRLVQLQFPCEEAGVPKGCENLDMIPSLATATSFFKAANLLQQPVEKLFEELTPPPSCIISDMCLPYTIHIAKKFNIPRISFGGVGCFYLLCLHNIRIHNVGENITSESEKFVVPGIPDKIEMTKAQAGQPMNESWNQFGYDVMAAEMGTYGVITNSFEELEPAYVRDYKNIRGDKVWCIGPVSLINKDHLDKAQRGRASIDVSQYLEWLDCQKPGTVIYACLGSLCNLTTPQLIELGLALEASERPFIWVIREGGHSEELEKWIKEYGFEESTNARSLLIRGWAPQLLILAHPAIGGFITHCGWNSTIEAICAGVPMLTWPLFADQFLNESLVVHVLKVGLKVGVEIPLTWGKEVEIGVQVKKKDVERAIAKLMDETSESEERRKRVRELAEMANRAVEKGGSSYSNVTLLIQDIMQKT* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1552 483 PANTHER GLYCOSYLTRANSFERASE 7 482 - -
Gso19g1552 483 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 281 400 IPR002213 GO:0008194
Gso19g1552 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 481 - -
Gso19g1552 483 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Gso19g1552 483 Gene3D Glycogen Phosphorylase B; 270 463 - -
Gso19g1552 483 Coils Coil 427 454 - -
Gso19g1552 483 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 482 - -
Gso19g1552 483 CDD GT1_Gtf-like 8 458 IPR002213 GO:0008194
Gso19g1552 483 Gene3D Glycogen Phosphorylase B; 5 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1552 Gso-Chr19 44478864 44480999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1552 1 481 Glycosyltransferase AT2G36800 55.397 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1552 K13496 - gmx:100777426 965.681