Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1549 ATGGCCAAGAAGAGAACCACGCCTCAGAAGAAGAAGACCCAGACGATAATTCCCATGCCAAAACATTCTCAACAGCCAAGAAGCTCACCTCCCAAACGCCGCACTGATTTCTCTTTCTTTACGCGCTCCCCCTCCTCCTTCTCCAACCCTACTTCTGGTTCCTCACCAGGTTCATCTTCTGGTGAAGTGAGGTTGTCCAATGTTGCTTCAAGCAGTTTGCAGGGGAGGAAAATGGTAATGAAACAATTTTCTGAAGATATAATGGTTCAATGCAGCATTTACCAAGAGGGTAGACCAGTATGTTCATCTGAGTCTTTTGATACTCCAGTTGTGGAAGTTGATTCAGCTGTTCAAGATGAAATTCTCAACCTTGGAGGACATAGGGCTGCTTGCAATGAAAAAATTGATATTTCCAAGATGTCAGAATCTACCCGTCTTGAATCATATGTCTGTGATAGCAGTTCTCTTGCTGCAACTCCTGGAAATGTTGTATGGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAGATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTTTTAGTTCAGTTTTATGGAAATCTTCCCAGTGCCTGGATTGATCCAATGACAGATATTTCAACTTTTGAGGATTCTTTTGAAGACAAGAGCAACAACCCTTCAGAAGATTTTCAACAGGCTTTAAAGAAGGCCTTACAGAGGAAGGCACAACTTAGTTCTTGCCAAAAGTTGACTCTTGATAGGTCTGCTCACTCTGATATGCAAGAACGTTCATCTGATAAATGCACTTCAACTAGCACAAGCAAAACAATTGATGATGTTCAAGAGAAACGAAGAGGGAAAAGGGAACGTAAACCGAAAGTTCACTTTGATGAGGTAACATACCCAATGAAGTCTGAAAGAAAGGTTCGTCGGTTGAAGATAATGCGGTACCTCGGCCTTGCTCCTCCAGTTGGTTCTCCCTTTTGA 990 0.4354 MAKKRTTPQKKKTQTIIPMPKHSQQPRSSPPKRRTDFSFFTRSPSSFSNPTSGSSPGSSSGEVRLSNVASSSLQGRKMVMKQFSEDIMVQCSIYQEGRPVCSSESFDTPVVEVDSAVQDEILNLGGHRAACNEKIDISKMSESTRLESYVCDSSSLAATPGNVVWARTDGQVWWPAEILEETSALSNPGSGGHVLVQFYGNLPSAWIDPMTDISTFEDSFEDKSNNPSEDFQQALKKALQRKAQLSSCQKLTLDRSAHSDMQERSSDKCTSTSTSKTIDDVQEKRRGKRERKPKVHFDEVTYPMKSERKVRRLKIMRYLGLAPPVGSPF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1549 329 MobiDBLite consensus disorder prediction 278 297 - -
Gso19g1549 329 PANTHER ALDOLASE-RELATED 276 329 - -
Gso19g1549 329 PANTHER ALDOLASE-RELATED 158 281 - -
Gso19g1549 329 MobiDBLite consensus disorder prediction 1 70 - -
Gso19g1549 329 MobiDBLite consensus disorder prediction 30 70 - -
Gso19g1549 329 ProSiteProfiles PWWP domain profile. 160 218 IPR000313 -
Gso19g1549 329 PANTHER OS08G0477800 PROTEIN 158 281 - -
Gso19g1549 329 PANTHER OS08G0477800 PROTEIN 276 329 - -
Gso19g1549 329 Gene3D - 151 252 - -
Gso19g1549 329 SUPERFAMILY Tudor/PWWP/MBT 159 250 - -
Gso19g1549 329 MobiDBLite consensus disorder prediction 254 297 - -
Gso19g1549 329 Pfam PWWP domain 161 240 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1549 Gso-Chr19 44422135 44428828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1549 - - gmx:100776360 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1549 19 44422135 44428828 Gso3g1571 3 41659510 41666717 GST