Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1534 ATGGCGAACATCACATCTGCTGCAATCGCAAACCCCTTTACTTACCCTATTTTACCACCACCATTAGTTCATAGTTTGGCCTTGGAGATGCTATTAGATATGCGGAGCAGGCAATCCATGTTCAATTTTGAATTGCAGGTTCCTGCATGGTCTTGTTCATGGGATCTCAACAATTCACATTACATATATGCTGGACTACAGAATGGTTGTGTCTTGGTGTTTGATATGTGCCAAACTGCAGGACCCATGAAATCTTTAGTTGGTTTGACTAGGAATCCTGTGCATACTGTACATTCTCTTTCACAAACTTCAAGTTTGTCTTCTGGTGTTAAAACCATCCTATCTGCATCTGCCATTGACCTTTGTCAGTGGAACATTGATTCTGAAGAGCGGCATTAG 399 0.416 MANITSAAIANPFTYPILPPPLVHSLALEMLLDMRSRQSMFNFELQVPAWSCSWDLNNSHYIYAGLQNGCVLVFDMCQTAGPMKSLVGLTRNPVHTVHSLSQTSSLSSGVKTILSASAIDLCQWNIDSEERH* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1534 132 SUPERFAMILY WD40 repeat-like 31 99 IPR036322 GO:0005515
Gso19g1534 132 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 31 131 - -
Gso19g1534 132 PANTHER RFWD3 PROTEIN 31 131 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1534 Gso-Chr19 44270354 44272915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1534 K15691 - gsj:114399303 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1534 19 44270354 44272915 Gso3g1556 3 41480305 41483001 GST